Ascochyta rabiei: EKO05_0008106
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Entry
EKO05_0008106 CDS
T09445
Name
(RefSeq) MutS protein msh4
KO
K08740
DNA mismatch repair protein MSH4
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arab03036
]
EKO05_0008106
Chromosome and associated proteins [BR:
arab03036
]
Eukaryotic type
Meiosis-specific proteins
Others
EKO05_0008106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
PH_FAN
Motif
Other DBs
NCBI-GeneID:
62216326
NCBI-ProteinID:
XP_059493187
LinkDB
All DBs
Position
14:complement(join(542874..543741,543790..544129,544175..544208,544256..544428,544477..544684,544730..544879,544924..544964,545011..545329,545379..546140))
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AA seq
964 aa
AA seq
DB search
MAGSSRPSTSYLSSSTSYPSASTSYPSASTSYPSASTSYPSASTSYPSASTSYPSASTSY
PSASTSYPSASTSYPSASTSYPSASTSYGHGDYNTTTSRPRTRPGTGRPSTARPRTGAST
VARVESQHVVCAVAESRGISPTVGLAFVNLDTGEAVLCQINDSQTYVRSIHKLKVYGPSE
ILIVATASSPKSKLFSIVEENLEDIGSKITLLDRRYWADSTGYEYIQALAFKEDVEAIKV
SVQGNYYAICCIAAALKYIELGLGTHFSYHSLRMRYEPSEGSMLIDVSTIYSLELVQNLQ
RPKSKDCLFGLLNETLTAMGARLLRNNILQPLTDPDVLTTRYLAVDELTTREEMFFATRA
ALKNSLDADRILTALIVKPVKPTLQTTEQAINQVIMLKQFVSSVKPIFEALTGARSSMLN
NIRELCAPENILPIQELIDEVINEDTTYAKQPLELRNQRTYAVKSGVNGLLDVARTTYKE
ATEDAYQHCTELGQEYDIQLALKYENARQFYIKIPLSELDGKGLPPVFTNVIRRKNNIEC
QTLELMKRNQKINVSHQEVVLMSDQAIDALIEAARGHMSVMFKICEAVALLDMIAAFSQL
VTVNDYTRPQLTETLAIKSGRHPIKEKITQNKFVPNDVYATQQTRFQIITGCNMSGKSTY
IRTVALMSIMAQIGCFVPASYASFPILHQLFARLGMDDSIETNVSTFAAEMREIAFILRN
IDRRSMAIIDELGRGTSTRDGLAIALAIAEALVSSKALVWFATHFKDLATIMHERAGVLN
LHLAVDMEREQNMTMLYKISQGTVKETHYGLALARVVPLPPGVVDRAAVVAQKLERHMLR
RKKTSEVVLKEKRRKLILNLKEHLVQAQTGVLEGEVLTAWLKELQREFVNRMTALEAEAA
RVSREMDDEDEEMGEASEHEQPGTPARHSSAVSISSRMNSTESESTIRPASEASSVRAVS
DNER
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctcttcaaggccgtctacctcttacctctcgtcctctacctcttacccctca
gcctctacctcttacccctcagcctctacctcttacccctcagcctctacctcttacccc
tcagcctctacctcttacccctcagcctctacctcttacccctcagcctctacctcttac
ccctcagcctctacctcttacccctcagcctctacctcttacccctcagcctctacctct
tacccctcagcctctacttcctacggccatggtgactacaacacgacaacttcgcgccct
cgcactcggccaggcactggcagaccgtccacagctcgaccgagaaccggtgcttcgact
gttgccagggtcgagtctcaacatgtggtgtgcgccgttgccgagtctcgcggtatctca
cccaccgttggcctggcttttgtcaatctcgacaccggagaagctgtgctctgccagatc
aacgacagccagacctacgttcgctccatccacaagctgaaagtctacggcccttcagag
atactcatcgttgcaacagcgtctagccccaagtcgaagctcttctcgatcgtcgaagag
aaccttgaagatatcggcagcaaaatcactctgctcgaccgccgctactgggctgactcg
accggctacgagtacatccaagccttggccttcaaggaagatgtcgaggccatcaaggtc
tcggtccagggcaactactacgccatctgctgcattgcagcggcactcaagtacatcgaa
ctgggtcttggaacgcacttctcgtatcactcgctccggatgaggtatgagccgtcggaa
ggatccatgttgattgacgtgtccaccatctactcgcttgagcttgtgcagaacctccag
cgtccaaagtcgaaagactgtctgtttggactcctcaacgagaccctgacagcaatgggg
gcccgccttctcaggaacaacatcctgcagccgctcaccgatcctgacgtgctcaccacc
aggtaccttgccgttgatgagctgaccaccagggaagagatgttctttgcgacgcgagct
gctctgaaaaattccctagacgccgacaggatcctgactgctctcattgtgaaaccggtc
aagccaacgctacagacgacagagcaggccatcaaccaagtgatcatgttgaagcagttt
gtgtcttccgtgaagccaatattcgaggctcttactggagccaggtcgagcatgctgaac
aacatccgcgagctctgcgccccagaaaatatcttgccgatccaggaactgattgatgaa
gtgatcaacgaagacaccacttacgcgaagcagcctctcgagctccgcaaccagcgcacg
tacgccgtcaagtctggcgttaatggcttgcttgatgttgcccggactacctacaaggag
gccacggaggatgcgtaccagcactgcacggagctcggccaggagtatgacattcaactc
gccctcaagtatgagaatgctcgtcagttctacatcaaaattccattgtctgagctcgac
ggtaaagggcttccaccagtcttcaccaacgtcatccgccgcaagaacaacatcgagtgc
caaaccctagagttgatgaagcgcaaccagaagattaatgtctcacatcaagaagtcgtt
ttgatgagtgatcaagccatcgatgcgctcatcgaggcagctcgtggccacatgtcggtc
atgttcaagatttgcgaagctgtcgcactgctggacatgatcgctgccttctcgcagctc
gtgacggtgaacgactatactcgaccacagcttaccgagacgcttgccatcaagtccggc
cgacatcccatcaaggagaagatcacgcagaacaagtttgtgccgaacgatgtctacgcc
acacagcagacgcgcttccagatcatcaccggatgcaacatgagtggcaagagcacttac
atccgcactgttgcgttgatgtcgatcatggctcagatcgggtgctttgtgcctgcatcg
tatgcctcgttcccgatcttgcaccagctcttcgcacggctgggcatggacgacagcatc
gaaacgaatgtgtccacgttcgccgctgagatgagggagattgccttcatcctccgcaac
atcgaccgacgcagcatggcgatcatcgatgagctgggccgtggcacaagcacgcgggat
ggcttagctatcgccctggccatcgcggaagctctcgtttctagcaaggccctcgtgtgg
ttcgcgactcacttcaaggatctcgccaccatcatgcatgagcgtgccggcgttctcaac
ctgcatctggctgtcgacatggagcgggagcagaacatgaccatgctgtacaagatctct
caaggcaccgtcaaggagacgcactacgggctggctcttgctcgagtcgtgccacttcct
ccgggagtagtcgaccgcgccgcagttgttgcgcagaagctcgagcgccacatgcttcgc
cggaagaagacgtcggaggttgtgctcaaggagaagcggcgcaagctcattctgaatctc
aaggagcatcttgtgcaggcgcagacaggcgtgctggaaggcgaggtgctgacggcatgg
ctcaaggaactgcagagggagtttgtcaatcgcatgacagcgcttgaggccgaggctgca
cgagtgagtcgggaaatggatgacgaggatgaagagatgggggaggcaagtgagcatgag
cagcccggaacgcctgctcgtcattcctcggccgtgagcatctcgtccaggatgaattcg
acagagtccgagtccaccatccggcccgcgtccgaagcgtcgtcagttcgagccgtatcg
gataatgaacgttag
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integrated database retrieval system
