Ascochyta rabiei: EKO05_0008107
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Entry
EKO05_0008107 CDS
T09445
Name
(RefSeq) ribosome assembly
KO
K14855
ribosome assembly protein 4
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0008107
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
EKO05_0008107
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
DSE1_N
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ASA1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
PAC11
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_SPT8
WDR54
Beta-prop_Vps41
WD40_RFWD3
WD_LRWD1
Beta-prop_NWD2_C
eIF2A
Beta-prop_HPS5
NLE
Beta-prop_ACSF4
Beta-prop_EMC1_N
Tricorn_N
PROPPIN
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
DUF4550
Motif
Other DBs
NCBI-GeneID:
62216327
NCBI-ProteinID:
XP_038796572
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All DBs
Position
14:546372..547907
Genome browser
AA seq
511 aa
AA seq
DB search
MATQYPPPSKRQKRAQAEFTREQQDVDTTLPDGTVRVRFVDQATGESGSLPVLTVPLSQA
TTKNLEILLNELKDQADDQVPYRFFHDEATEALGDKEDLYNALVRSGKASAESEIVLQYA
PQAVFRVKAVSRCAAAVSGHGDNILAVQFSPLNSGRMASGSGDKTVRIWDCDTGTPVHTM
KGHTRWVLAVSYSPDGSLLASGGYDNEVRIWDPETGKQVGSALKGHTHFITSLCWEPYHL
QEPGRPRVASSSKDGLVRVWDAVGGKIDFALAGHKGSVTCVKWGGTGRIYTSSHDKTIKV
WNAATGSLLSTLSGHAHWVNHLALSTDFVLRTAYHDHTRKVPATAEEKVAKAKARFEKAA
TISGEIVERLATASEDCTLILWTPLTSPKPVTRMTGHQKQINQVVFSPDGQLLASAAWDN
HVKLWSARDGKFLNTLRAHVGPVYMASFSADSRLLASCSKDTTLKVWDMRTGKLKEDLPG
HKDQVFALDWSPDGDKVGSGGADKQVRIWRN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacaatacccgcctccctcgaagcggcagaagcgcgcgcaggccgagttcacg
cgcgaacagcaggacgtcgacacgaccctccccgacggcaccgtacgcgtgcgctttgta
gaccaggccacgggtgagagcggcagcctgcccgttcttactgtccctctctcgcaagcc
acgaccaagaacctcgagatcctcctcaacgagctcaaggaccaggccgacgaccaggtc
ccctaccggttcttccacgacgaggctacggaggcgcttggggacaaggaagatttgtac
aatgcactggtcaggtcagggaaagcctcggcagagagcgagattgtgctccagtatgcg
ccgcaggctgtgtttagggtgaaggcggtgtcgagatgtgcggccgccgtgtccgggcac
ggcgacaacatcttggccgtgcagttctccccgctgaactctggacgtatggctagtgga
agcggagacaagaccgtcaggatatgggactgcgacacaggaacaccggtgcacacgatg
aagggccacacgaggtgggtgcttgctgtcagctactccccagacggctccctgcttgcc
tctggaggctacgacaacgaagtccggatctgggaccccgagacaggaaagcaggtcggc
agtgcgctgaaggggcacacccacttcatcacgtcgctctgctgggagccataccacctg
caagagccagggcggccgagggtagcgtcgtcgtccaaggacggactggtacgcgtgtgg
gatgctgttggcggcaagatcgactttgcactggcgggacacaagggcagcgtgacgtgt
gtgaaatggggcggcacgggccgcatatacacgtcctctcacgacaagacgatcaaggtg
tggaatgccgccactggctcgctgctcagcaccctgtccggccacgcacattgggtgaac
catctcgcgctgtcgaccgactttgtcctacgcactgcctaccacgaccacacacgcaag
gttcccgcgacagcagaagagaaggtggccaaggcgaaagcgcgcttcgagaaggccgcc
accatcagcggcgagattgtggagcgccttgcgaccgcttcagaagactgcacgttgatc
ctgtggacgccgctgaccagcccgaagcccgtgacgcggatgacgggacatcagaagcag
atcaaccaggtcgtgttttcacccgacggccagctgctcgcgtctgcagcgtgggacaac
cacgtcaagctctggtccgcgcgcgacgggaagttcctcaacacgctgagagcgcacgtg
ggaccggtgtacatggccagcttctccgccgacagcagactgctcgccagctgcagcaag
gacacgacgctcaaggtgtgggacatgcggacgggcaagctgaaggaggacctccccggc
cacaaggaccaggtgtttgcgctggactggagtccggatggcgacaaggtgggcagcgga
ggagcagacaagcaggtgcggatatggaggaactga
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integrated database retrieval system