Ascochyta rabiei: EKO05_0008138
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Entry
EKO05_0008138 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K13217
pre-mRNA-processing factor 39
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0008138
Spliceosome [BR:
arab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
EKO05_0008138
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
DUF4547
Motif
Other DBs
NCBI-GeneID:
62216355
NCBI-ProteinID:
XP_038796600
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All DBs
Position
14:complement(join(637075..638356,638656..638975,639025..639114))
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AA seq
563 aa
AA seq
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MLPTGRGAIALVEYTGEEAAPEIRKLLSAVVENEDEFDRWEAIVTRASELEGGVTRNSSP
SAIELVRNVYDCFLQKFPLFFGYWKKYADLEFAIGGTETAEMVYERGVCAITTSVDLWAN
YCTFKMDTCHDNDIIRELFERGAHFVGLDFQSHPFWDKYIEFEERVQEPANATKIYSRVL
LLPIYQFSRYYEKFTALIGTRPIEDLAEPETLETIKNAIQLENQGYPEKAPLELERQLRE
KIHAYYYESYSRTQQDVQNRWNFEQAIKRAYFHITELEDAELDNWRKYLDYEEKQGDFER
TSFLYERCLVACALYDEFWLRYARWMFSQGKEENARIIYMRASCIFVPIEAPTIRLNWAR
FEEKLGRISVAREIHTAMLEQAPEHVETIVSLAGLVRRHEGNDEAVKVLEEYIGQRNNQV
GGVLVGEQARILWQCKGAVDEARQAFKDKHQKFLDSRDFWHKYLQFEIDQPSSDQEEAHK
RVKAVHDLVLAKGRLSPEASKQLSHFYMAFLLNRGGKDAAEEYIKLDKEVNGYVSSASSD
PSPSHPSKRKKQPHNAANKRQRK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctactgggcgcggtgccattgcgcttgtcgagtacacgggagaggaggctgca
cctgagattaggaagctcctcagcgcagtggtcgagaacgaagatgagttcgacagatgg
gaggcaatcgtcactcgcgcctctgagctcgagggcggcgtcacccgtaactcgagtcct
tccgcgattgaactcgtgcgcaatgtctacgactgcttcctccaaaagtttccgcttttc
tttgggtactggaagaagtacgccgatcttgaattcgcgataggaggcacggaaaccgcg
gagatggtgtacgagcgtggtgtgtgcgccatcaccacctccgttgatctgtgggccaac
tactgcaccttcaagatggatacatgccacgacaacgatatcattcgagaacttttcgag
cgaggagcccacttcgtcggccttgacttccagagtcaccctttctgggacaagtacatc
gaattcgaagagcgggtgcaggagcctgcaaatgctacaaagatctacagccgtgtctta
ctccttcctatctaccagttctcccgctactacgagaaatttaccgccctaatcggtacg
cgaccaatcgaagaccttgccgagcctgagactctcgagaccatcaagaacgcaatccaa
ttagagaatcaaggataccccgagaaggctcctctagagcttgagcgacagcttcgcgag
aagattcacgcatactactacgagtcgtactcgcgcacgcagcaagatgtccaaaatcgc
tggaacttcgagcaggccatcaagcgtgcatacttccacatcacggagctcgaagatgct
gaactcgacaactggcgcaagtatctcgattatgaagaaaagcagggcgacttcgagcgc
acgtcgttcttgtacgagcgttgcttggttgcctgtgcgctctacgacgagttctggctg
cgatacgcacgatggatgttctcccaaggaaaggaagagaatgcgcgcatcatttatatg
agagccagctgcatattcgtgcctatcgaggcccccaccatccgcctcaattgggcacgt
ttcgaagagaagctcggtcgcatctcagtcgcccgtgagatccatacagccatgctcgag
caagccccagaacacgttgagaccattgtctcccttgctggtctggtgcgaaggcacgag
ggcaacgacgaggccgtaaaggttctcgaggagtacattggccaacgcaacaatcaggtt
ggtggtgttctggttggcgagcaagcacgcatcctgtggcagtgcaagggtgcggtagac
gaggcccgccaggccttcaaggacaagcatcagaagttcttggattcgagggatttctgg
cacaaatacctgcagtttgagatcgaccagccttcttctgaccaggaagaggctcacaag
cgggtcaaagcggtgcacgatctggtgctcgccaaaggacgcctctcaccagaagcatcg
aagcagctgtcacacttttacatggccttcctgctcaatcgtggaggcaaggatgctgcg
gaggaatacattaagctggataaagaggtcaacgggtatgtatcatctgcttcaagcgat
ccctccccatcccatccctcgaaacggaagaagcagcctcacaacgcagcaaacaagcgt
caacgcaagtga
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