Ascochyta rabiei: EKO05_0008205
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Entry
EKO05_0008205 CDS
T09445
Name
(RefSeq) Clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
arab
Ascochyta rabiei
Pathway
arab04142
Lysosome biogenesis
arab04144
Endocytosis
arab05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
EKO05_0008205
04142 Lysosome biogenesis
EKO05_0008205
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
EKO05_0008205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0008205
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arab04147
]
EKO05_0008205
Membrane trafficking [BR:
arab04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
EKO05_0008205
Exosome [BR:
arab04147
]
Exosomal proteins
Proteins found in most exosomes
EKO05_0008205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
TPR_COPA_B
VPS18_solenoid_2nd
TPR_Vps41
EST1-like_DNA_bind
Motif
Other DBs
NCBI-GeneID:
62216415
NCBI-ProteinID:
XP_038796660
LinkDB
All DBs
Position
14:join(800371..800415,800469..800489,800563..800589,800648..801022,801072..802188,802241..802940,802995..803676,803890..804706,804758..805671,805724..806077)
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AA seq
1683 aa
AA seq
DB search
MAQRQVPLHVTQPTLLTNLNILPASISWQNCTLESDKYVCVRQVNNDANTPAETVIIDLK
NTNNVIRRPIRADSAIMHLTEPIIALKAQGRTLQLFNLETKERLQTYSHQEDIVFWRWIS
QTTLALVSSKAVYHWDVLESKTSTPRKIFDRQEQLEGNQIINYVTNDDESWSCLVGIAAG
PNGGIRGNMQLFSKARNVSQPLEGHAATFGTLRLDGATTDTKLFAFAVKSSSGEAKINIV
EVDHAASNPAFPKRLIPIHWPAEGTGDFPLGIHIAHKYGILIVITKFGFIHLHDLETGTA
LFLNRISEETVFTTARDDEGTGVVVINKRGQVLHTTIREDTLIPYIMENPACAEIAYKLA
SKGGLPGADQLYNQRFEQLMNQGNFAEAAKVAASSPRGFLRTMNTINRLRSVPQQPGQIT
VLLQYFGQLLDKGGLNREETLELARPVFAQGRKHLIEKWQKEGKLHCSEELGDLAKPHDL
NLALAIYKEANVPQKVVAALAELGHYDMIVQYCNSVGYTADYNVLLQHVIRSNPEKGSEF
AIQLAKNEGGPLISTDRVVDIFQSQGMIQQATAFLLDVLSNDREEEGHLQTKLLEMNLLN
APQVADAILGNEMFHHYDKARIASLCENAGLLMRALEHNDDPATVKRIIVQTDKLPEEWL
INYFGQLTVELSLECLDAMLTTNIRQNLQAVIRIAQKYSDLLGATRIIDLLEKHRTAEGL
YFFLGSIVNVSEDPDVHFKYIEAATTMGQLNEVERICRESNYLNPEKVKNFLKEANLTEQ
LPLIIICDRFNFIHDLVLYLYKKQQFKSIEVYVQRVNPARTPQVIGGLLDVDCDESIIKG
LLASVTPSSIPIDELVSEVESRNRLKLLLPFLEQTLAAGNQQQAVYNALAKIYIDSNNNP
EKFLRENDQYDTLTVGKYCEKRDPNLAVICYSKGQNDLELVNITNENAMFKAQARYLLER
ADSEIWDFVLNDNNMHRRSLVDQVTSVAVPESTDPDRVSVAVKALITNDMPAELIDLLEK
ILLEPTTFSDNPSLQNLLMLTAAKSDRGRVANYIQQLENYTPEDIAQQCIEVGMYDEAFE
IFKKHGQHVDAVNVLVDHIVSIDRAQDYADRVDAPEVWSRVAKAQLDGLRVTDSIESYIR
AGDASNFLEVIEVATHAGKDEDLIKFLKMARKTQREVPIDTALAFSFARTNQLPELEEFL
RGTNVADVEASGDKAYEEGYHEAAKIFFTSISNWAKLATTLVHLEDYQAAVECARKANSV
KVWRQVNEACVAKKEFRLAQICGLNLIVHAEELSELVKQYERDGYFDELISLLEAGLGLE
RAHMGIFTELGIALAKYHPERVMEHLRLFWSRINIPKAIRATEEAHLWPELIFLYVHYDE
WDNAALAMMERASDAWEHQAFKDTITKVSNVEIYYRALGFYLEEQPTLLTDLLQALAPRI
DVNRVVRMFLKSDNIPLVKPFLLNVQSQNKREVNNALNDLLIEEEDYKTLRDSVNSYDNY
DPVDLAQRLEKHELVFFRQIAADIYRKNKRWDKSIALSKQDKLFKDAIETAAISSKSEIV
EDLLRYFVDIGSRECYVGMLYACYDLIRPDVILEISWRNGLHDFTMPYMINLLSRQTAAI
ELLTKDNEERKARETSQQKKEDDTPILGSRLMLTQGPIASAPSPGPYQMSNGIAPQPTGY
RGF
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcgccaggtcccattgcacgtcacgcagccgacgctgctcacgaacctgaac
attctcccggcatcgatatcgtggcagaactgtactctcgagtccgacaagtacgtttgc
gtgcgccaggtcaacaacgacgccaacacccccgccgagaccgtcatcatcgatctgaag
aacacaaacaatgtcatccgcagaccgattcgcgcagacagtgcgattatgcacttgact
gagcccatcattgctctcaaggcgcaaggccgcacgctgcagctcttcaacctcgagaca
aaagagcgcctgcagacatacagccatcaggaggacattgtgttctggaggtggatcagc
cagactacgctcgcgctggtcagctcgaaggctgtgtaccactgggacgtgctggagtcg
aagacatctacaccacgcaagatcttcgaccgccaggagcagctcgagggcaaccaaatc
atcaactacgtaacaaacgatgacgagagctggtcttgtttggttggcattgcggcgggt
cccaatggaggcatccgtggcaacatgcagctgttttccaaagcaaggaatgttagccag
cctctcgaaggtcacgcagccacctttggcacactccgtctcgatggcgcgacaaccgac
accaagctcttcgcgttcgctgtaaagtcgtcctccggcgaggctaagataaacatcgtc
gaagtcgaccacgccgcctcaaaccccgctttccccaaacgactgatcccgattcactgg
cctgctgagggtactggtgatttcccgctcggcatccacatcgcgcacaagtacggtatc
ttaatcgtaattaccaagttcggtttcatccacctacacgacctcgagaccggtaccgct
ttgttcttgaacaggatctcggaagagacagttttcaccacggcccgcgacgatgagggc
accggtgtggttgtgattaacaagcggggacaggtcttacacacaactatccgtgaggac
acgttgattccttacatcatggagaacccggcgtgtgcggagattgcctacaagctcgca
tctaagggtggtcttcctggagctgatcagttgtacaaccagcggttcgagcagttgatg
aaccagggcaactttgctgaggcggccaaggtggctgccagctcacctcgcggcttcctt
cgcacaatgaacaccatcaaccgtttgcgatcggttccccagcagccaggccagatcact
gtcctcctgcagtactttggtcaactgcttgacaagggcggcctgaaccgggaggagaca
ctggagctagcgcgtcctgtgtttgcgcagggccgcaagcacctcatcgagaaatggcaa
aaggaaggcaagcttcactgctctgaagagcttggtgatctcgccaagccccacgacctg
aacctcgcgctggcaatctacaaggaggccaacgtccctcagaaggtcgtagctgctcta
gccgagcttggccattacgacatgatcgttcagtactgcaactctgttggttataccgct
gattacaacgtcctcctgcagcatgtcatccgaagtaacccagagaagggcagtgagttc
gctattcagctcgcgaagaacgaaggcggcccactcattagcactgaccgcgttgtggac
atcttccagtcccaaggcatgattcaacaggccactgccttcctcctggatgttctttct
aacgatcgtgaggaggagggtcacctgcagaccaagctgcttgagatgaatctgctcaac
gctccccaagttgctgatgccattctcggaaacgagatgttccaccactacgacaaggcc
cgcatcgcctccctttgcgagaacgctggtctgcttatgcgcgcattggagcacaacgat
gaccctgcaactgtcaagcgcatcatcgttcagaccgacaagctgcccgaggagtggttg
atcaactacttcggccagctcacagtcgagctctcactagagtgtcttgacgccatgttg
actaccaacatccgacagaacctgcaagctgtcattcgcattgcccagaagtactcggac
ttgctcggtgccacccgcatcatcgatctccttgagaagcaccgcacagccgagggtctg
tacttcttcctaggctccatcgtcaacgtcagcgaggacccggacgtccatttcaagtac
attgaggccgcgacaaccatgggccagctgaacgaagttgagcgtatctgtcgtgagagc
aactacctcaaccctgaaaaggttaagaacttcctgaaggaagccaatctgaccgagcag
ctgcctctcatcatcatttgcgatcgcttcaacttcatccatgacttggttctgtacttg
tacaagaagcagcagttcaagtctatcgaggtttacgtgcagcgcgtcaaccccgccaga
actcctcaggtcattggaggtctgctcgatgtcgactgcgacgagagcatcatcaagggc
ctcttggcttcggtcacaccctcctcaatccctattgacgagcttgtgtctgaagtcgag
tcgcgcaaccgcctcaagcttcttttgcccttcttggagcagaccttggctgctggcaac
cagcaacaggctgtttacaacgccctggctaagatctacattgattctaacaacaacccg
gagaagtttttgagggagaacgaccagtatgacacccttaccgtcggtaaatactgcgag
aagcgcgacccgaatcttgcggtcatctgttactccaagggtcagaacgacctggaactt
gtcaatattacgaacgagaacgctatgttcaaggctcaagctcgctacctgctcgagcga
gctgactcggaaatctgggactttgtcctgaacgacaacaacatgcatcgccgatccttg
gtcgatcaagtcacctctgtagccgttcctgaatcaaccgatcccgaccgcgtatcagtc
gcagtcaaggcgcttatcaccaacgatatgccagctgagctcatcgatctgctcgagaag
attctcctcgagcctaccacgttcagcgacaacccgtccctgcagaacctcctcatgctc
acagcagccaagtccgaccgtggccgtgttgccaactacatccagcaacttgagaactac
actcctgaggacattgctcagcagtgcatcgaggttggcatgtatgatgaggccttcgag
atcttcaagaagcacggtcagcatgtcgatgccgtcaacgtcttggtcgatcacattgtc
agcatcgatcgtgctcaagactatgcagaccgagtggacgcaccagaagtctggagcaga
gtcgccaaggctcagctggacggtcttcgtgtcactgactcgatcgagtcctacatccgc
gctggagacgcttcgaacttcctcgaggtcatcgaggttgccactcacgcaggcaaggac
gaggatcttatcaagttcttgaagatggcccgcaagacccagcgtgaagtcccgatcgat
actgctctggcctttagttttgctcgtaccaaccagctgccagagctagaggagttccta
cgtggaaccaacgtagcagatgttgaagcatctggagacaaggcttatgaggagggctac
cacgaggcagccaagatattcttcaccagcatttcgaactgggccaagcttgccaccact
cttgtacacctcgaggactatcaggctgccgttgaatgcgctagaaaagccaattcggtc
aaggtgtggaggcaagtcaatgaggcctgtgtcgctaagaaggagttccgccttgctcag
atctgtggtctcaacctcattgttcacgctgaggagctttccgagcttgtcaagcagtat
gagcgcgacggctacttcgacgagcttattagtcttctcgaggctggactcggtctagag
cgagcacatatgggtattttcaccgagttgggcattgctctcgccaagtaccacccagag
cgtgttatggaacatcttcgcctcttctggtctcgcattaatatccccaaggcgatccgt
gctaccgaggaagctcatttgtggcctgagctgatcttcctgtacgtccactatgacgag
tgggataatgcagcattggcaatgatggagcgtgcatctgatgcttgggaacaccaagct
ttcaaggacaccatcacgaaggtttccaacgttgagatctactaccgcgcattaggcttc
tacttggaagagcagccaaccttgttgaccgacctcctgcaagcactggctcccaggatt
gacgtcaaccgtgtggtccgtatgttcctcaagtctgacaacatcccgctcgtcaagccg
ttcctcctcaatgtccagtcccagaacaagcgtgaggtcaacaacgcccttaatgacctt
ctgattgaggaagaagactacaagacattgcgcgactcggtcaacagctacgacaactac
gatcctgttgatcttgctcagcgtcttgagaagcacgagctcgtcttcttccgccagatt
gcggccgatatctaccgcaagaacaagcgatgggacaagtcgattgcgttgtcgaaacag
gacaagctgttcaaggatgctatcgagacggcggcgatctcgagcaagtccgagattgtg
gaagacctgcttcgctacttcgttgatatcggaagccgggagtgctacgttggtatgctc
tacgcttgttacgatctcatccgtcctgatgtcatcttggagatatcatggcgcaatgga
ctccacgacttcacgatgccgtatatgatcaacctcttgtctcgccagactgcggctatt
gagttgcttacgaaggacaacgaggagcgcaaggctcgcgagacatcacagcaaaagaag
gaggacgatacaccgatcctcggttcgaggcttatgctgacgcaaggcccgattgcttcg
gcaccgtcaccaggtccttaccagatgtcgaatgggatcgctccccagccgacgggttac
cggggcttttag
DBGET
integrated database retrieval system
