Ascochyta rabiei: EKO05_0008209
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Entry
EKO05_0008209 CDS
T09445
Name
(RefSeq) Rhamnogalacturonan endolyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EKO05_0008209
Enzymes [BR:
arab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EKO05_0008209
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GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
62216419
NCBI-ProteinID:
XP_038796664
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Position
14:complement(join(816849..817748,817799..817927,817986..818437,818489..818693))
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AA seq
561 aa
AA seq
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MRTTSIFAALAAAETILAKGPFLQKISSDQWVIGNDLWNVTQGATYATNLQYQGSDAVGK
AQGHYAGYDGESNLVFTSAAIVSNSAAEYIDVSFSSSLGDLHWVIYPDLTGAYQYFVNKA
LPDISIFRTLWRLDPDRFTHGFNTNKNEKLPDFALYANAPEIQDETFQFPDRSYVTKYDF
ADYVRERDFVGVYGDKTGSWYIHPTNEYQPGNHLSQTLTVHRESATGDAVQLNVVQDTSH
FRVGVKTPQPVGKVWGPWLWYLNDGSVSDARARAAHERATFPYAFLNNTAYHSRGKIEGK
LTLSDGRPAAGAAVFVGDVDTSTRPLVQGSNYYYTTFADASGGFSIHNVRSGSYGLVAAS
NGGVIGDVYTNFTSSPIVVSKGKTSNLGSLTWQVPANTKRIFQIGDFDKKATGFTNSGPH
VHGLTEKSAANLTYTIGTSKTSEWNYASSKLGSWAVVFNTTRPRASTKARLSVSLAGYSQ
STSVTIQLNGNKTIGSISKDSLSSDPALYRSGTISGEWHLLQYEIAAGDLVEGRNVLAFT
TDRYTLWRGVLWDSIILEWVL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccacttccatctttgcagcacttgctgcggcagagacgatactcgcaaagggc
ccgtttctccagaagattagctcggatcagtgggtgattggtaatgacctgtggaacgtg
acccagggcgcaacatacgctaccaacctgcaataccaaggctcagatgctgtagggaaa
gcacaaggtcactatgctggatatgatggcgaatccaacctggtcttcacgtctgctgcc
atcgtctccaactctgccgccgagtacatcgacgtctccttctcctcgtcccttggcgac
ctccactgggtcatctacccggatctgacgggggcctatcaatactttgtcaacaaagca
ttgccggacatttccatattccgcaccttgtggcgtcttgacccggatcgcttcacgcac
ggcttcaacaccaacaagaacgagaagctgccggactttgccctgtacgccaatgcccca
gagatccaggatgagacttttcagttccccgatagaagttatgtgacaaaatacgatttt
gcagactatgttcgagagagagactttgtgggtgtttacggagacaagacggggagttgg
tacatccacccaacgaatgagtatcagccaggaaaccacctgagtcagacattgacggtc
catcgcgagtcggcaacaggagacgctgtacagctcaatgtagtgcaagacacgtcccac
ttccgcgtcggtgtcaagacgcctcagcctgttggtaaggtctggggcccttggctctgg
tacttgaacgacggctctgtgtcggatgctcgtgctcgtgctgcccatgagcgcgcaacg
ttcccctacgccttcctgaacaacacagcctaccactcccgcgggaaaattgagggcaaa
ctgaccctctccgacggtcgtcctgcagcaggcgcagcggtcttcgtcggcgacgttgac
acctctactcgtccacttgttcaggggtcgaactactactacaccaccttcgccgatgcc
agcggcggattttccatccacaacgtccgctccggctcctacgggctcgtcgccgcgtcg
aacggcggcgtaatcggagacgtatacaccaacttcacatcatctcccatcgtcgtcagc
aaaggcaagacatcaaacctaggcagcctgacatggcaagttcccgcaaacacgaagcga
atcttccagataggggattttgacaaaaaggccactggcttcaccaactcaggcccgcac
gtgcacgggctgacggagaagagcgccgcgaacctgacgtacacgatcggcacctccaag
acgtccgagtggaactacgcgtcgtcgaagctggggtcgtgggccgtcgtgttcaacacg
acgcgcccgcgcgccagcaccaaagcgcgcctctccgtgtcgctggcgggatacagccag
agcacgagcgtgacgatccagctcaacggcaacaagacgataggcagcatcagcaaggac
tcgctgagcagcgacccggcgctgtaccgctcgggcaccatcagtggagagtggcacttg
ctgcagtacgagattgcggcgggggatctcgtcgagggccggaatgtgctggcgtttacg
acggatcggtatacactgtggcggggggtgctgtgggatagcattatcctcgagtgggtc
ttgtaa
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