Ascochyta rabiei: EKO05_0008239
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Entry
EKO05_0008239 CDS
T09445
Name
(RefSeq) RNA polymerase II transcription elongation factor SpEAF
KO
K11397
chromatin modification-related protein VID21
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arab03036
]
EKO05_0008239
Chromosome and associated proteins [BR:
arab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NuA4 complex
EKO05_0008239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
HSA
Myb_DNA-binding
KIND
Motif
Other DBs
NCBI-GeneID:
62216450
NCBI-ProteinID:
XP_038796695
LinkDB
All DBs
Position
14:join(893992..894047,894171..894311,894416..897551,897600..898610)
Genome browser
AA seq
1447 aa
AA seq
DB search
MSLDGHRDALLREKRNESVTCNESRKRKLRELYKYTVYLEVPDKWATNTQLDQLEGRFLD
ENDIEKGRRFNDATTLPFPHSGQQPTLPSTLPFAHPGKPVFSPFAGSSPSPLTGASLEEQ
LRAASASPSVVSQPLPPSDALTHSDEHRTSRPSSIAPPAGTPSPSQASFAEERVSSKAST
TAQPITEVPGVQEVGVGSLVDREDPSVDPKSVADSAVGDQDASTIPAVNEKPRTPKVVHL
PSKETQESRLQETERKLDHVANKERREDERFTLPQSNGPTEMVSSPSSTVGPYSQATPHA
PHHSPDTSPDTEAFHDTTHPLESNEDILDPAAQQVKEDHERALQKQMKEARERARRPDSP
TSDVEKQIEDEQAIRLARDGKSRLGESTDNTGHSLTQEAEQVISESDVAQSTKEQPEHTA
DSLPTPTTTAPEPSVLDREATETVMAQSKENPAADHPTPPADIDLDMTQAPAMAQEEATL
AQTSPRCERMTTRVSSGAIRQRSVSEIISEHAAQKTFLTPQSSNLSSPQRPRHQDRKSME
VSTVVFAKKNPVKSYKTTQTYDQDYASLQGASEDSSRDYLEGLFKFQAHHPPRSVPLQEL
VASARKTVSTAGTLAMIRENQDYKILKRVYQLQNANRWSLRQLQKSAEPERPFTHQDLLL
LEMKWMQTDFKEERKWKHALAATLADWCAEYVHSSPEERIALRVKTSIPKSILESTNDND
MHDAPTPDLVPSGAHETESESYADEDELLTPFHADPPAGVFSLGYNDVVIKIDRTPASDH
MFRELPFYEPMLEGASDVTPFSISEPPILPVSKFVTGKLVSQIRGPPRKRSRYDYDSEDE
PSTPPSRAGTSAEHSMPSTPGRRLFCRNDLPPEMTDVALFNAENKHVRDRLQAAHQFRPP
TEFNMPSVAFFENRTPSQWLWEEDQKLRALVKEYTFNWSLVAQQLALPSKFTSGSGRRTP
WECFERWVQLEGLPAEMSKTQYFRTYQGRLEQANKVVFAQYQAQQQQQQQQSGGQTPGQP
RRRPTTTPIRVERRRENRHLAIIDGMRKLARKRESVAHKQAESQKAAALRKAHEPAPPKN
NVHTPQEFSRLKWEREERLKQKQLQQEIAVRNQMAVQRQAQHNAQNGVPNGVPQMQRNGT
PGGANSNMPAQMANNPSQQAQNAAAMAARAQQSQQGMPNNLGNANMTGMSMGTPGVPQAQ
MQSNMQNGQRMGPPDQMRMAMQRNQFNSPNQQQFHLQQQQQQMSMANAQGMNMNGIPNAN
MMASMSNQNLNGNMNASMNGMPNGASSPRVNQAAPNMQRPNGANAGGHVPQYLQLQNTIK
MQHPDWTPEQVQKSASDQLQRYMAKQRVQAMNAAAGSPGISSPSPQMANQFMQQNGGMAN
SPPVNAVQNYQQQLVQQQRLMSQQRQPQQAGSPGMNGRPPSRSATPQNPQQMQQSPGLVQ
AQPNRPT
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgacggccatcgtgatgcattacttagggagaagcggaacgagagcgtgacg
tgcaatgagtctcgcaagcgcaagctgcgcgagctttacaagtatacggtctacttggag
gtgcccgacaagtgggccaccaacacccagctggaccaacttgaaggtcgctttttagac
gagaacgacattgaaaaaggtcgacgcttcaatgatgcgacaacacttccattcccacac
tctggacagcaaccaaccttaccatcgacactacccttcgcacatcctggaaagcctgtg
ttctccccatttgcgggatcgtcgccgtctccgcttactggcgccagtctggaggagcaa
ttacgtgcagcatcagcctcgccgtccgttgtttcgcaaccactgccaccttctgatgca
ctgacacacagcgacgaacatcgcacttcgaggccatcatcaatcgcccccccggcaggc
accccgtcaccatcccaggcgtcctttgcagaagagcgggtttctagcaaggcctccacc
acggcgcagcccatcaccgaagtaccgggtgtccaggaagttggagtaggaagcttggtt
gaccgagaagatccttctgttgatccaaaatctgttgctgattcggccgtcggagaccag
gacgcgtcgactattcctgcggtgaatgagaagcctaggacacccaaggttgttcatctc
ccgtcgaaggagactcaggaatcacgattgcaagagacggaacgcaaactggaccacgta
gcgaacaaagaacggagagaggatgaacgatttacattaccacaaagcaacggtccaacc
gagatggtctcatcgccgtcctcgacggtcggaccgtactctcaagcaacaccgcatgcg
ccccaccactctcccgatacgagccccgatacagaagccttccacgacactacccacccg
ctcgaatccaatgaggatattctggaccctgcagcacagcaagtgaaggaagaccacgag
cgcgctttacagaaacagatgaaggaagctcgagaacgcgcccgtaggcccgattctccg
acatcagacgttgaaaagcaaatcgaagacgagcaggctatacgcctagcacgagatgga
aagagtcgacttggtgaatcgacagacaatacaggccattcactgacgcaggaagccgaa
caggtcatcagtgaaagtgatgttgcacagagcacgaaggaacaaccagagcatacggca
gactcacttcctacaccaaccacaactgcacccgagccatctgttctggatcgtgaagcc
accgagaccgttatggcgcaatcgaaggagaatccggctgcagaccaccctacgcctcct
gctgatatcgatctcgacatgactcaagcaccggcaatggctcaggaagaggccacactt
gcgcagacctcgccgcgctgtgagcgtatgactactcgtgtgtcttccggtgctatccgc
caaagatcggtctcagagatcatcagcgagcatgcagcacaaaagacgttcctgacacca
cagtcgagtaacctgtctagtccccagcgccctcgacatcaggacagaaagtccatggag
gtgtcaacagtggtgtttgcgaaaaagaacccagtcaagtcttacaagacgacgcaaacc
tacgaccaagactatgcatcgttgcaaggggcttctgaggattcaagtcgggactatctc
gagggcctcttcaagttccaagctcatcatccaccacggtccgtgcccttgcaagagctc
gttgcgtctgctcggaaaactgtttctacagctggcacccttgctatgattcgcgaaaac
caagattacaagatactaaagcgtgtttaccagcttcagaatgcaaaccgatggtctttg
cgacaactgcaaaagtctgctgaaccggagcgtcctttcacacatcaagatcttcttctt
ctggagatgaaatggatgcaaaccgatttcaaggaagagagaaagtggaagcatgctctc
gcagcgacccttgcagactggtgcgccgagtatgttcacagcagccctgaagagcgcata
gctcttcgagttaagacaagcattccaaagtccatactggaatccacaaacgacaacgat
atgcacgatgcgccgacaccagatcttgtaccttcgggcgctcacgaaaccgagagcgaa
tcatacgcggacgaggacgagcttctgacgccgttccatgccgaccctcctgctggtgtg
ttctcgcttggctacaacgacgtcgtcattaagatcgatcgtactccggccagcgatcac
atgttccgcgaattgccgttctacgaacccatgcttgaaggcgctagcgatgttacgcct
ttttcgatatccgaacctcctattcttcctgtctcgaagtttgtaactggcaagttggtt
tcacagatcagaggtccacctagaaagcgcagcagatacgactatgattctgaagacgaa
ccttccacaccgcctagccgggctggaacctctgcagagcactcaatgccctctactcca
ggaagaaggctgttctgtcggaatgatcttcctcctgagatgactgatgttgccctgttt
aatgccgagaacaagcatgttcgagacagactgcaggcagcgcaccagttcaggccaccg
actgagttcaacatgccctcagttgctttcttcgagaatagaactccgtcgcagtggctc
tgggaagaagatcagaagctccgtgctctcgtcaaggaatacaccttcaattggtctttg
gtggcgcagcagttagcattgccatcgaaatttacttcggggtctgggcgccgcacgcct
tgggaatgctttgagcgctgggtacagctagaagggttacctgctgagatgtccaagacg
cagtacttccgcacataccaaggtcgattggagcaggcaaataaagtcgtgtttgctcaa
tatcaggcgcagcaacagcaacagcaacaacagtctgggggacaaacaccagggcagcct
cggagacgccctacgaccacaccaattcgcgtggagaggagaagagagaaccgccacctt
gccattatcgatggtatgcgcaagctcgcccgaaagcgggaatcggtcgcacataagcaa
gcggaatcgcaaaaggctgcggcgctcaggaaggcgcatgagcctgcgccacccaagaac
aatgtgcacactccgcaagagttcagccgtctcaagtgggaacgcgaagagaggctgaag
caaaagcaattgcaacaggagatcgccgtcagaaatcagatggcggtgcagcgccaagct
caacataacgcgcagaacggtgtcccgaacggcgtaccgcaaatgcaacgcaacggcaca
cccggcggcgccaactccaacatgcccgcgcagatggctaacaacccatcgcaacaggct
cagaatgcggcagcaatggcagcgcgagctcagcaaagccagcaaggaatgccaaacaac
cttggcaatgccaacatgactggtatgtccatgggcacacccggtgttccccaggcacaa
atgcagagcaacatgcagaacggccagcgaatgggacctccagaccagatgcgtatggcg
atgcaacggaaccaattcaacagtccgaaccagcagcagtttcacttgcaacagcaacag
caacagatgagtatggcgaacgctcagggcatgaatatgaatggcattcccaatgcgaac
atgatggcgtcaatgagcaaccaaaacctgaacggaaacatgaacgcctccatgaatggt
atgcccaacggcgccagttctccacgagtgaaccaggcagcgccaaacatgcagcgtccg
aacggagccaacgcaggtggccacgttcctcaatatctgcaactgcagaacaccatcaag
atgcagcatccggattggacgccagagcaggtgcagaaatcagcttctgaccagctccag
cgatacatggctaagcaacgtgtgcaagcaatgaacgctgcggcgggctctccaggaatt
tcatcgccatcgccgcagatggccaaccaattcatgcagcagaacggcggcatggctaac
agcccgcctgtcaatgcggttcaaaactaccagcaacagttggtgcagcaacaacgacta
atgagccaacaacgacaaccgcaacaggccggcagcccgggaatgaatggacgaccaccg
agtagaagcgcaacaccacaaaacccgcagcagatgcagcagagtcccggcttggtacaa
gcccagcccaaccgacctacctga
DBGET
integrated database retrieval system
