Ascochyta rabiei: EKO05_0008308
Help
Entry
EKO05_0008308 CDS
T09445
Name
(RefSeq) Translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0008308
03012 Translation factors [BR:
arab03012
]
EKO05_0008308
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
EKO05_0008308
Translation factors [BR:
arab03012
]
Eukaryotic type
Initiation factors
eIF-3
EKO05_0008308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
TetR_C_28
Motif
Other DBs
NCBI-GeneID:
62216511
NCBI-ProteinID:
XP_038796756
LinkDB
All DBs
Position
14:complement(join(1058814..1060773,1060867..1061129))
Genome browser
AA seq
740 aa
AA seq
DB search
MATSYENLPLEDDEFDESQIDFTDIEEQFQVRLDEGLDAFVVIDGLPVVPEDSKSKLVKF
VLRKLNSVGRVKDDGVHMPVGEDGKTEGYAFVEYSAPAEAIAAVKQLHGTPLDKKHIMAV
NKLTDIDRYGKEGRIDEEYHEPEIAPFEQKEHLRWWLGDPDSRDQVAMYRGEKVGVFWND
REDQPEVVVDRENWTESFIQWSPQGTYLTSIHAQGVQLWGGKAWSRQKRFAHPGVNLVDY
SPGENYLTTWSHRPLQVDENHPVPSLSLEDDGKNYVIWDVATGKPLRSFATIDVPSGIDA
EGNPIKKKMQWPTFKWSADEKYVARLTQGQSISVYELPRMNLLDKSSIKIEGVVDFEWAP
ATPKRDGVKTYEQLFCYWTPELGSNPAKVGLMSIPSKEIVRTRNLFNVSDAKLHWQSEAA
YVCVKVDRHSKSKKSLATNLEIFRVREKGVPVEVVDSIKDAVINFAWEPKGNRFVLITTG
EVVVQAAVPPKTAVSFFAPEKLKGGAPGNFRHIRTVDKKNSNAIYWSPKGRFVVVAALQS
QQSFDLDFWDLSFEKPKDEAEKGEKELNANLQLMDTAEHYGVTDIEWDPTGRYVATVASA
FRHRMENGYHLYDFKGALLREEHIDGFKQLLWRPRPPTLLSKEEQAEIRKNLRNYSKIFD
EQDVAKKSSANRAVVEARRETLQEWNQWREEVQQRLREEGAELEISAGKGEVPGDAGDAE
TEEIEEIVEEIIEETEEIIN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttcatacgagaacctcccgctggaggatgacgagttcgacgagtctcagatc
gacttcaccgacatcgaagaacagttccaagtgcgccttgacgagggtctcgatgccttt
gtcgttatcgacggcctgcctgttgtccccgaggacagcaagtccaagctcgtcaaattc
gtgttgagaaagttgaacagcgtggggcgcgtcaaggacgatggcgtgcacatgcccgta
ggcgaggatggcaagactgagggctatgccttcgttgagtacagcgcgcccgcagaggct
atcgcagctgtcaagcagctccacggaaccccgctcgacaagaagcacatcatggccgtg
aacaagctcaccgacatcgaccgctacggaaaggaaggccgcatcgacgaggagtaccac
gagcccgagatcgcgcctttcgagcagaaggagcacctgaggtggtggctgggagaccca
gacagccgtgaccaggtcgccatgtaccgcggtgagaaggtcggtgtcttctggaatgac
cgggaagaccagcccgaggttgttgttgaccgtgagaactggaccgaatccttcatccag
tggtcaccacaagggacataccttacttcaattcacgcacaaggtgtgcagctttggggt
ggcaaggcatggagcaggcagaagcgattcgcacatcccggtgtcaacctcgtcgactac
tcgcctggtgagaactacctgactacctggtcgcaccgcccgctgcaggtcgatgagaac
cacccggtcccctccctgtcattggaggacgacggcaagaactacgtcatctgggatgtc
gcgactggcaagccgctgcgttcgtttgctacaatcgacgttcccagcggtattgatgcc
gagggcaatcccatcaagaagaagatgcagtggccgacattcaagtggtcagccgacgag
aaatacgttgctcgtctgacccagggccagtccatctcagtctacgagctgcctaggatg
aacctgctggacaagtcctccatcaagattgagggtgttgtagatttcgagtgggctcct
gctactcccaagcgcgatggtgtcaagacatacgagcaacttttctgttactggactcct
gagcttggcagcaaccccgcaaaggtcggtcttatgtccattccttcaaaggagattgtt
cgtacacgaaacctcttcaacgtgtctgatgctaagcttcactggcaatctgaggctgcc
tacgtttgcgtcaaggttgatcgtcactcaaagtccaagaaatctctggccacaaacctc
gagattttccgcgttcgcgaaaagggtgtgcccgtcgaggttgtcgactccatcaaggat
gccgtcatcaacttcgcctgggaacccaagggcaaccgtttcgttctcatcaccactggt
gaggtcgttgttcaggctgctgtcccccccaagactgctgtctctttcttcgcccccgag
aagctcaagggcggtgctcccggtaacttccgccacattcgcactgtcgacaagaagaac
agcaacgccatttactggtcgcctaagggtcgattcgttgttgtcgctgctctccagtct
caacagtccttcgaccttgacttctgggatctcagcttcgagaagccaaaggatgaggcc
gagaagggcgagaaggagctcaacgccaacttgcagctcatggatacggctgagcactac
ggtgtaactgacatcgagtgggaccctacgggccgctatgttgccactgttgctagtgct
ttccgtcaccgcatggagaacggctaccacctgtacgacttcaagggtgctcttctgcgt
gaagagcacattgatggctttaagcagcttctgtggcgtcctcgtcctcctacacttttg
tccaaggaggagcaggccgagatccgcaagaaccttcgtaattacagtaagatcttcgac
gagcaggatgttgccaagaagagctccgccaaccgcgccgtcgtcgaggctcgcagggaa
acgctccaggaatggaaccagtggcgtgaggaggtgcagcagaggctgcgtgaggagggt
gctgagcttgagatcagcgctggaaagggcgaggtgcctggcgatgctggcgatgccgag
actgaggagattgaggaaatcgtcgaggagatcattgaggagactgaggagatcatcaat
tag
DBGET
integrated database retrieval system
