Ascochyta rabiei: EKO05_0008428
Help
Entry
EKO05_0008428 CDS
T09445
Name
(RefSeq) RING-type E3 ubiquitin transferase
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arab04121
]
EKO05_0008428
Enzymes [BR:
arab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
EKO05_0008428
Ubiquitin system [BR:
arab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
EKO05_0008428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
Helicase_C
zf-rbx1
zf-RING_UBOX
zf-RING_5
Prok-RING_4
Baculo_IE-1
zf-C3HC4_4
VIR_N
New_glue
Motif
Other DBs
NCBI-GeneID:
62216625
NCBI-ProteinID:
XP_038796870
LinkDB
All DBs
Position
14:complement(join(1379282..1380415,1380464..1383673,1383724..1384017))
Genome browser
AA seq
1545 aa
AA seq
DB search
MACLQVDAGVLALWSHAANDPPGASSGSASLSTPLIHQDAVHGLEALDGLFAAAASQCHG
EERPQKRRKLEGNPLAEAHPVYFPDNRSILLAKVSINLNPAPSLAASRPTPLLWDTAKPV
VLCLDNFSEFDASESRIVLFDITTNSSIEILATIEVGALQSIKAHVKAAASLAHNTQRRK
NRAKPRAAFSRCLLTPSTAASHLYMLEIEIRWLLGISVVEDPSVSVHHMKEDLRLLSTYL
RGAAAQSDTLWELSDFYNSVHVPPTDLHVSPQIQHKLVDTTLYPFQQRAVDWLLRREGVA
YSEAGLLVPFVEDVPPASFRVAQDANGTACYVSGLRGMVVADLEAAKGDALQSLKGGILA
EEMGLGKTVELIALISHHKRPSLDGTVFDANAGAHVRTSGATLIITPPSILEQWRSEIHT
HAPDLKVFHYKGLPPSSASKKEHTTATVDELMRYDVVLTTYGVLSKEIHYATPPPDRPSR
YERRHERRKSPLVEISWWRVCLDEAQMVESGVSNAAKVARVIPRCNAWAVSGTPLRKDIQ
DLRGLLTFLRCDTFAQNKLVWGRLDKSSFHAIFNHITLRHTKEKVRNDLRLPPQKRAVIT
IPFTAIEEQNYADLVRQMCDECWLGPEGEPLDADSDPTSPETLERMREWLVRLRQTCLHA
HVGRKNRRALGTRNGPLRTVHEVLEIMIDQNSTRWKADARETIMNRIKMGHVKAYAGNVE
NRAETALPFYVEALEDTKVYVSMCRQELEQEQKKLGVSVALKCDGDSDAEEGLEKDNLGN
ISSIRRTLRSFLELEHMCKFFIATTHHQKKEYLDAQQTDAETSLREEQLETEWYDQAKAV
RRELLGEVKTTTQRQMRRIETRKPFHQLPIVDELPDLGGIESRRVLETIDEISDFMNAQA
AKIEEWRTKIVDILLMRLTDDDDDLETTGEEYETSLKAQDELYVSIMALRTLVADRSLAV
HGLRDTLIDEELRTAEKKARNTDPEKDNGHAPELLLEFVKQRQELLSTLHGSSLKGVIAE
LRSKITPLQWRAENDDNRAAAESTVLHKHLSSVQVIMTQQSKALVEMEKEQELFRGTMNQ
RLEYYRQFQHISDTVASYKEKLDDKFDQATFQVFDYRRGKSLEAVNAFRAKHAYLLNLRA
EDQKNVAADCIICQEAIEVGVLTTCGHKYCKECINQWWHAHRTCPLCKQKLKSSDFKDIS
LKPSEMTAKTDFPAEEASPQASTPKRKDMAIYSDLSDTTVKEIKMIDLPGSYGSKIDMIA
KHLLWIRANDPGAKSVIFSQYRDFLDVLDTAFKAWKIGTSSIRDRDGISRFKQDAATEAF
LLDAKSDSSGLNLVNATYVFLCEPLINPALELQAIARVHRIGQQRPTAVFMYLVANTVEE
AIYDISVARRLQHMKSADVASTETETDTETETSASTSTGTSTGTSTGTSTGTSTGTSTGT
STGTPPPPPPPPAAQKQKQKQKQKQEQEQEQETSLDMANSAEMQAAPLKQLLSKGGGGEA
VRNDDLWSCLFGKPRRDGQGGGGGGGVTAALRHEGEGRFRVTMGL
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtctccaggtcgacgcgggggtcctggctctctggtcgcatgcagccaacgac
cctcctggagcaagctctggcagtgcatcactttcaacgccactgatacaccaagatgct
gttcacggcctcgaagccttggatggtctcttcgccgctgctgcttcccaatgccacggc
gaagagcgtccgcagaagaggcgcaagcttgaaggcaaccccttggccgaggcacatccc
gtatattttccagacaatcggagcatactcctcgcaaaagtttccatcaatctgaaccct
gctccgagcttagcagcatctcgcccaacaccactgctatgggacactgcgaagcccgtt
gtattgtgcctggacaatttctccgaattcgatgcgagcgagtccagaatcgtgctcttc
gacatcaccacaaactcgagcatcgaaattcttgccaccatagaggtcggcgcattacag
tcgataaaagcgcacgttaaagccgccgcatcgctcgcgcacaacacgcaacgccgcaaa
aatcgagccaagccgcgggccgccttctctcgctgtctgcttacaccttctactgcagca
tcgcacctatacatgttggagattgagattcggtggctcttgggtatatctgtcgtagaa
gatccttctgtgagcgtccatcacatgaaggaagacctgcgcttgctctcgacatacctt
cgtggcgcggccgcacagtctgacacgttgtgggaactctcagatttctacaattcagtt
catgtcccacctaccgatttgcacgtttctccccaaattcagcacaagttggtcgatact
accctttatccgtttcaacagagggctgttgattggctgttgcgacgagaaggtgtggcg
tattcggaggctggacttctggtgcctttcgttgaagatgtgccacctgcatctttcagg
gtggcgcaagatgcgaacgggactgcatgctacgtcagtgggctccgaggcatggtcgta
gcggatttagaggctgcgaaaggtgatgcactgcaatcgctaaagggcggaattctagcg
gaagagatgggtctcggcaagaccgtcgagctgattgctctgatctcacatcacaagcgg
ccaagtttggacggaacagtctttgatgcgaatgcaggagctcacgttcggacgtctggt
gccacccttatcatcactcctcccagtatcctcgagcaatggcgaagtgaaatacacacg
cacgcgccagacctgaaagtcttccactacaaaggcctgccaccatcaagcgcatcgaag
aaggaacacacgacagcgacggtcgatgagctgatgcggtatgacgtggtcttgaccact
tacggcgtactgtcaaaagagatacattacgccacgcctcctcctgatcgaccgtctcga
tatgagagacgccatgagcgtcgcaaaagcccgcttgtcgagatatcgtggtggagagtc
tgcttggacgaggcacagatggtggaaagtggagtgagcaatgcggccaaagttgctcgt
gtcatacctcgatgcaatgcttgggctgtttcggggactccactgcggaaagatatacag
gacttgcgtggtcttttgactttcttgagatgcgacacttttgctcagaacaagcttgta
tggggacgcttggacaaatcctcgtttcacgccattttcaatcacataactctgcggcac
accaaagaaaaagtccgcaacgatcttcgtcttcctccgcagaagcgggccgtcatcact
attccgttcacggccatcgaggagcagaattacgccgatctggtccgtcagatgtgtgat
gagtgctggctgggaccagaaggagagccgttggacgcagacagtgatcctaccagcccg
gaaactcttgagcgaatgcgcgagtggcttgttcgattgagacaaacatgtttgcatgca
cacgtcggacgcaagaacagaagagctctaggtaccagaaatggacctctgcgaacagtc
catgaagttctagaaattatgatcgatcagaacagtaccaggtggaaggctgatgcacgt
gaaacaatcatgaatcgaatcaaaatgggccacgtcaaggcgtatgctggcaatgtcgag
aaccgtgcagagactgcattgcccttttacgtcgaggccttggaggatacgaaagtgtat
gtttccatgtgccgacaggaactcgagcaagagcagaagaagctaggcgtatcagtcgca
ctcaaatgcgatggagattctgacgctgaagaaggcttggagaaagataacctaggcaac
atatcttccattcgcagaacgctgcggtcattcttggaacttgagcacatgtgcaagttt
ttcatcgccacaacgcatcatcagaagaaggaatacctcgatgcacaacaaacagatgcg
gaaacgtctcttcgtgaagagcaacttgaaacagagtggtatgaccaggccaaggcagtt
cgacgcgaactactgggagaagtcaagactactactcaacgtcaaatgagaagaatcgag
acccggaaaccttttcaccaactgcctattgttgacgaacttccggatcttggcggaatt
gagagccgtcgggttttggaaacgatcgatgaaatcagcgattttatgaatgcgcaagct
gcaaagattgaagaatggaggaccaagattgtcgacatcctgttgatgcgtctgacggac
gacgatgatgacttggaaaccaccggagaagagtatgaaacttctttaaaagcgcaagac
gagctgtatgtgtcgatcatggcacttcgtactcttgtcgcagaccggagccttgcagtc
cacgggttgcgggatactcttatagatgaagagctcaggaccgctgaaaagaaagctcgc
aacacggaccctgagaaagataatggccacgcgcctgagctactactcgagtttgtaaaa
caacgccaagagctgttgtcgactctgcacggcagctctctgaagggcgtgattgcggag
cttcgttcgaagatcactccgttgcaatggagagcagagaacgatgacaaccgcgccgca
gctgaatctaccgtgctccacaagcatctgagcagtgttcaagttatcatgacacaacag
tcgaaagcccttgtcgaaatggaaaaagagcaagaactattccgtggcacgatgaatcaa
cgtctagaatactatcgccaattccagcacatctcggacacggtcgcttcatacaaagag
aagctggacgacaaattcgaccaagcgactttccaggtatttgactaccggcgaggcaag
agtttggaggccgtgaatgccttcagggcaaagcatgcttacttgctaaacttgagagcc
gaagatcagaaaaacgtagctgccgactgcatcatctgtcaggaagccattgaggttggt
gttctcacaacgtgtggacacaagtactgtaaagaatgcatcaatcagtggtggcacgcg
caccgcacatgcccgctgtgcaagcagaaactgaagagttccgacttcaaagatatcagt
ctcaaaccaagtgagatgactgcgaaaacggactttccagcagaagaagcctctcctcag
gcgtcgactccaaagcgaaaggacatggccatatactcggacctgagtgacacgaccgtc
aaagagatcaagatgatcgacctgcccggttcatacggctccaaaatcgacatgattgca
aaacacctgctctggatccgcgcaaacgatcccggcgccaaatccgtcatcttctcgcaa
taccgcgacttcctcgacgtgctcgacacagccttcaaagcatggaagatcggcacctcc
agcatccgcgacagagacggcatctcgcgcttcaagcaagacgcagccaccgaagccttc
ctactcgacgccaaatccgactcgtcgggcctgaacctcgtcaacgcaacctacgtgttc
ctgtgcgaaccgctcatcaaccctgcgctcgagctgcaggccattgcccgcgtgcaccgc
atcggccagcagcgccctaccgccgtcttcatgtacctcgtcgccaacacggtcgaggag
gccatttacgacatctccgtcgcccgccgcctgcagcacatgaagagcgccgacgttgca
tcgacggaaacggaaacggatacggagacggaaacatctgcatctacatcgacaggtaca
tcgacaggtacatcgacaggtacatcgacaggtacatcgacaggaacatcgacaggaaca
tcgacaggaacaccaccaccaccaccaccaccacccgccgcgcagaagcagaagcagaag
cagaagcagaagcaggaacaggagcaggagcaggaaacctcgctcgacatggcaaactcg
gcggaaatgcaagccgcgccgctaaagcagctgctcagcaaaggcggcgggggcgaagcc
gtgcgcaacgacgatctgtggagctgtttgtttgggaagccgcggagagacggccagggt
ggtggtggtgggggtggtgtgacggcggcgctgaggcacgagggggaggggcggtttagg
gttacgatggggttgtag
DBGET
integrated database retrieval system
