Ascochyta rabiei: EKO05_0008557
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Entry
EKO05_0008557 CDS
T09445
Name
(RefSeq) DNA-directed RNA polymerase
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
arab
Ascochyta rabiei
Pathway
arab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EKO05_0008557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0008557
Enzymes [BR:
arab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EKO05_0008557
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
EKO05_0008557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
ZCCHC24_C
Motif
Other DBs
NCBI-GeneID:
62216757
NCBI-ProteinID:
XP_038796097
LinkDB
All DBs
Position
15:join(319224..319238,319301..322784,322845..323011)
Genome browser
AA seq
1221 aa
AA seq
DB search
MVGTKEAPKATPKAPPRGAARAKAAAAAAAAAATDGSVQDADASNGGPVGAESAAADGQP
PADVNPNAALSAEATRKRKAPLNTQAKDEFAALLEPFYYGKRLDEPINTARDKWNLLPAF
LKVKGLVKQHVDSYNHFVDVELKKIIKANRFVRSDFDPKFLLEYTDIRVLSPNRQEEDDL
EHHHSTITPNECRLRDMTYAAPIVVDIVYTRGNAKVKRTGIKIGRMPIMLKSNKCVLAAK
NDREMAVMEECPLDPGGYFITRGQEKVILVQEQLNKNRVIVESAKGIMQASVTSSTHERR
TKTYVIQKKGLMFLRHNTLSEEVPVVFALKALGVHSDKEILLMVAGDDSAYQDSFAINFE
ACAREGIHTQEKALEYIGHRVRLTKKPLGASRMRNYHLEAIECLSNVILPHVPVVGTNYR
PKALYVALMARRVLMAMQDSKLVDDRDYVGNKRLELSGQMLSLLFEDHFKRFNHDFKLSI
DKVLKKQNRAQEFDAFSHFSVHKNHITMGIERAIATGNWSLKRFKMERAGVTHVLSRLSY
IAALGMMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTE
DDEGPVRKIVFLLGAEDICSQTGEEIHAEGVYSVCLNGTPIAVTDTPKRFLNSFRKLRRM
GRISEFTSIHIDHDHCEVHIATDEGRICRPMIIVENERSKVTSRYLKALRKGTMEFEDFL
TRGLVEYLDTNEENDTNIALSEKDINQHTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTY
QCAMGKQAIGAIAYNQFNRIDTLLYLMVYPQQPMVKTRTIELTKYDKLPAGQNATVAVMS
YSGYDIEDALILNKASCDRGFGRCQVMKKHVTPLKTYANGTSDRINAGALDTNKQEHQAI
GADGIAQVGARLEAGDAYLLKSIPTDTAGPASNQYKDKPERYKLPDCSYIDKACITENEA
GTTLIKLLMRQTRRPELGDKFSSRHGQKGTTGLIVQQEDMPFNDAGICPDIIMNPHGFPS
RMTVGKMMELLSGKAGVLNGTLEYGTAFGGSKVEDMSEILVSNGFSYTGKDYLTSGITGE
AHQFYTFFGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRARSGGLRLGEMERDCLI
AYGASQLLLERLMISSDAHDVDVCEKCGQMGYSGYCKLCESEKAVRRITMPYAAKLLIQE
LGSMNVKVTIGLEDEFPRHMD
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcaccaaggaagcgccaaaagccacccccaaagctcccccgcgcggggcagcg
cgggcgaaagcagcggcagcagcagcagcagcagcagccacagacggcagcgtgcaggac
gcagacgcaagcaacggaggccccgtgggcgctgagagcgcggctgcagacggacagccg
cccgcagacgtcaacccgaacgccgccctgtccgccgaagccacgcgcaagcgcaaggcg
cccctcaacacgcaggccaaggacgagttcgccgccctcctcgagcccttctactacggc
aagcgcctcgatgagcccatcaacaccgcccgcgacaagtggaacctgctgcccgccttc
ctcaaggtcaagggcctggtcaagcagcacgtcgactcgtacaaccacttcgtcgacgtc
gagctcaagaagatcatcaaggccaaccgtttcgtgcgcagcgacttcgaccccaagttc
ctcctcgagtacaccgacatccgcgtgctgtcgcccaaccgccaggaggaagatgacctc
gaacaccaccacagtaccattaccccgaacgagtgccgtctgagagacatgacctatgcc
gcgcccattgtcgtcgacatcgtctacacacgaggcaacgcaaaggtcaagcggaccggc
atcaagatcggaaggatgcccatcatgttgaagagcaacaagtgcgtgctggccgccaag
aacgatcgcgagatggccgtcatggaggagtgtccgctggaccctggaggctacttcatc
acccgcgggcaggagaaggtcattctggtccaagagcagctgaacaagaaccgtgtgatt
gtggagagcgcaaagggaatcatgcaggctagcgttacgagttcgacgcacgaacgacgc
accaagacatatgtcatccagaagaaggggctcatgttcctgaggcacaacacactctcc
gaggaggttcctgttgtgtttgcgctaaaggcattgggtgtgcactctgacaaggagatc
ttgctcatggtggctggagacgacagcgcgtaccaggacagcttcgccatcaacttcgag
gcatgcgcaagagagggaattcacacgcaagaaaaagccttggagtatatcggacaccgt
gtgcggttgacgaagaagccactcggcgcgtcgcgcatgcgcaactaccatctcgaggcc
attgaatgcttgtccaacgtcatcctgccgcacgttccagtcgttggcacaaattaccgg
ccaaaagctctctacgttgccttgatggcacgcagagtcctcatggcgatgcaagactcc
aagctggtcgacgatcgtgattacgtcggaaacaagcgtctcgaactctccgggcagatg
ttgtcccttcttttcgaagaccactttaagcgcttcaaccatgacttcaagctcagcatc
gacaaagtcttgaagaagcagaaccgcgcccaggaattcgatgctttctcgcacttcagc
gtacacaagaaccacatcaccatgggtattgagcgtgccatcgccaccggaaactggagc
ttgaagcgtttcaagatggaaagagccggtgtcacgcacgtcctcagtcgacttagttac
attgctgcgctgggtatgatgacgagaatcagttcgcagttcgaaaagacgcgaaaggtg
tccggacctcgtgcgctgcagccaagtcagtttggcatgctatgcacgtctgatacgccc
gaaggagaggcgtgtggtctcgtcaaaaacttagcgctgatgacgcatatcacaactgaa
gacgatgaggggccggtgcggaagattgttttcctgttgggcgcggaagatatctgctca
cagactggagaagagatccacgcggaaggtgtgtactctgtgtgcctgaatggtacgcca
atcgccgtcacagacacgcccaagcgattcctgaatagcttccgaaagctcaggcgaatg
ggtcgcatctcggaattcaccagcatccacattgatcacgatcattgtgaagtccacatc
gctacagacgaaggtcgtatctgtcggccaatgattatcgtagagaacgagcgctccaaa
gtcacatcgcgatacctcaaggctctgcgaaagggtaccatggagttcgaggacttcttg
acaagagggctcgtggagtatctggatacgaacgaggagaacgataccaacattgcgttg
tctgaaaaggatatcaaccagcacaccacacatctcgagatcgaacccttcaccatcctt
ggtgccgtcgctggtctcatcccatacccacatcacaaccagtcacctcgcaacacctac
cagtgtgccatgggtaaacaagctattggcgccattgcctacaaccagttcaacaggata
gataccttactctacctgatggtctaccctcaacagcccatggtcaagacaagaaccatc
gaactcaccaaatatgataaactgcccgctggtcagaacgccactgtcgcagtcatgtca
tactcgggctacgatattgaagatgcgctcattctaaacaaagcctcctgtgaccgcggt
ttcggtcgctgtcaagtcatgaagaagcacgtcacacctctcaaaacctacgccaacggc
acatctgaccgcatcaacgccggtgcccttgatacaaacaaacaggaacaccaagctatc
ggcgcagatggaatcgcccaggttggtgctcgcttggaagccggcgacgcctacctcctc
aagtccattcccactgacaccgcgggtccggcctcgaaccagtacaaggacaagcccgag
cgatacaagctgccggattgctcatacatcgataaagcatgtattaccgagaacgaagcc
ggaaccacgctcatcaagctcctgatgcgacagacacgacgccccgaactcggcgacaaa
ttctcctcccgtcacggccagaaaggaacaacaggtcttattgtccaacaggaagacatg
cccttcaatgacgccggtatctgcccagacatcatcatgaaccctcacggtttcccgtcg
cgtatgacggtcgggaaaatgatggaactgctctctgggaaagccggtgtactcaacgga
acgctcgaatacggtaccgcgttcggcggaagtaaagtcgaggacatgtccgagatcctg
gtcagcaatggattttcttacactggtaaggactacctaacgtcaggtatcacgggagag
gcgcaccagttctacacgttcttcggtccgatctattaccagaaactcaagcacatggtg
caggacaagatgcactcccgcgcacgaggcccacgcgccatcttgacccgccaaccaaca
gaaggtcgagccaggtctggaggtctgcgtctcggagaaatggagcgcgattgcctcatc
gcctacggtgcgagtcagttgctgctcgagcggttgatgatcagctccgacgcccatgac
gtcgacgtttgcgaaaagtgcggccagatgggctactcgggctactgcaagctctgcgag
agcgaaaaagcagtccgccgcattacaatgccctacgcggccaaactgctcatccaagaa
ttgggcagcatgaatgtcaaggtcacgattggactggaagacgagtttccccgacacatg
gactag
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integrated database retrieval system
