KEGG   Ascochyta rabiei: EKO05_0008604
Entry
EKO05_0008604     CDS       T09445                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
arab  Ascochyta rabiei
Pathway
arab03030  DNA replication
arab03410  Base excision repair
arab03420  Nucleotide excision repair
arab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:arab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EKO05_0008604
   03410 Base excision repair
    EKO05_0008604
   03420 Nucleotide excision repair
    EKO05_0008604
   03430 Mismatch repair
    EKO05_0008604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arab03032]
    EKO05_0008604
   03036 Chromosome and associated proteins [BR:arab03036]
    EKO05_0008604
   03400 DNA repair and recombination proteins [BR:arab03400]
    EKO05_0008604
DNA replication proteins [BR:arab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    EKO05_0008604
  DNA Replication Termination Factors
   ELG1-RFC complex
    EKO05_0008604
Chromosome and associated proteins [BR:arab03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    EKO05_0008604
DNA repair and recombination proteins [BR:arab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     EKO05_0008604
  Check point factors
   HRAD17(Rad24)-RFC complex
    EKO05_0008604
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 RCF1-5-like_lid AAA_14 AAA_22 Viral_helicase1 nSTAND3 AAA_16 RuvB_N Gp44_lid AAA_3 DNAX_ATPase_lid Rad17 Mg_chelatase nSTAND_NTPase5 AAA_assoc_2 AAA_19 AAA_11 MeaB NTPase_1 NB-ARC AAA_18 nSTAND6
Other DBs
NCBI-GeneID: 62216803
NCBI-ProteinID: XP_038796143
LinkDB
Position
15:complement(join(467228..468197,468250..468341))
AA seq 353 aa
MSKGESSKAAATKGVRANPNAAGGANYELPWVEKYRPVYLDDVVGNTETIERLKIIAKDG
NMPHMIISGMPGIGKTTSILCLARQLLGDAYKEAVLELNASDERGIDVVRNRIKGFAQKK
VTLPPGRQKLVILDEADSMTSGAQQALRRTMEIYSATTRFAFACNQSNKIIEPLQSRCAI
LRYARLTDAQVVRRIRQVCEAENVQYSDDGLAALVFSAEGDMRQAINNLQSTHAGFGFLN
ADNVFKVVDSPHPIKVQAMIKACHEQRIDDAMTTLKELWDLGYSCHDIISTMFRVTKTID
TLSEHAKLEFIKEIGFTHMRILEGVQTLLQLSGCIAKLCKINMQPQLFLMPSK
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgtcgaaaggagagtcctcaaaagctgccgccaccaagggcgtgcgagcgaatcccaac
gcagctggaggcgccaactacgagctgccatgggtcgagaaataccgtccagtgtacctc
gacgatgtcgtcggcaatacagagacaatcgagcgcctcaagatcatcgcaaaggacgga
aacatgcctcacatgatcatctctggcatgccaggtatcggcaagaccacgtccatcctc
tgtctcgcgcgacagttgctgggcgacgcctacaaggaagccgtgttggagctcaacgcc
tcagatgagcgtggtatcgacgttgtgcggaaccggataaagggttttgcgcagaagaag
gtgacgctgccaccaggcaggcagaagctcgtcatcctcgacgaagcagacagcatgaca
agcggagcgcaacaggcgctgagaagaaccatggaaatctacagcgctacaacacgattc
gcattcgcatgcaaccaatcgaacaaaatcatcgagccactccaatcgaggtgcgccatc
ctgcgctacgcccgcctcaccgatgcccaagtcgtccgccgaatcaggcaagtttgcgaa
gccgagaacgtacagtattccgacgacggactcgccgcgctggtcttctctgctgaagga
gacatgcgacaagcgatcaataaccttcaatcaacacacgctggattcggcttcttgaac
gccgacaacgtcttcaaggtggtggacagcccacaccccatcaaggtgcaggccatgatc
aaagcgtgccacgagcagaggatagacgatgcaatgacaacactgaaagagctgtgggac
ctgggctactcgtgtcacgacatcatcagcaccatgttcagggtcaccaagaccatcgac
accctcagcgagcacgcgaagctagagttcatcaaagagattgggttcactcatatgcgc
attctcgaaggtgtacagacgctactgcagctgtctggatgtatcgccaagctctgcaag
atcaacatgcagcctcagcttttcctcatgccatcgaagtga

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