Ascochyta rabiei: EKO05_0008747
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Entry
EKO05_0008747 CDS
T09445
Name
(RefSeq) Histone deacetylase
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arab01009
]
EKO05_0008747
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0008747
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0008747
03036 Chromosome and associated proteins [BR:
arab03036
]
EKO05_0008747
Enzymes [BR:
arab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EKO05_0008747
Protein phosphatases and associated proteins [BR:
arab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
EKO05_0008747
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
EKO05_0008747
Membrane trafficking [BR:
arab04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EKO05_0008747
Chromosome and associated proteins [BR:
arab03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
EKO05_0008747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
62216939
NCBI-ProteinID:
XP_038796279
LinkDB
All DBs
Position
15:join(960274..960859,960907..961933,961983..962094,962149..962250,962305..962396,962444..962523,962570..962685,962744..963124)
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AA seq
831 aa
AA seq
DB search
MNDVDVPMEDEIIASTECNGGPTDYTSEFVIPIDVFPTPNMAHLPKNAQLPPYGPSKSVS
SMRPTSRDDRSDKMDLVRTTPHRRASPQVRIPPKPRSQALPYATLKTGLVYDPRMRFHAE
LPSDTSVDEIHPEDPRRIHSIFEEIREAGLVRGPESSDSDENDEYCWRIGIRYAEEHEIL
TIHTKAHYDFVYSLQSMPEEEMHEWMDKLDSIYFNHSTYDCARLAAGGAIEACKAVVQGS
VRNAIAIIRPPGHHAESSQPSGFCIFNNVPIATRVCQDAYPQTCRKVLILDWDVHHGNGI
QHAFYDDPNVLYISLHVFRNGHFYPNLPDGNLDFCGEGDGIGKNVNIPWDDHAMGDAEYL
YAFQEVVMPIASEFDPDLVIISAGFDAAEGDVLGGCFVTPACYGHMTHMLSRLAKGKLVV
CLEGGYNLRSIARSALAVTRVLMQEPPDRLSEDLPAPKDSAVRTIEQVKHQHSKYWKCLY
PKKLERTDPGFAATDALHNVIREWQSQRLAREHCMTPLPLQINHPDLAPTFEHNVIATPD
FMERRPLLVIFHDPPSFRDHPDPVTGRRELHNTWLTDVSKSYIDWAITNGFSVIDVNVPH
IVTVEQQEGSSLGFASADDAKARSDKTREMANYLWTNYIHPSDATQVFFMGIGDAYQGLV
DLLGRNETTTDEDSRIEILIGFVAESSIQSVKRPTDDDIGAWYYYHTKIFVKQSHYAFSR
NSKKKLRKKLGNLQQSDWDTLDEMLMGHRDEVQELLLEKKSEFAEETETSTPTDDDQQAA
QNGGFRSPPLGLDTQAIEARHANGLRGLPPLGVFSSPKPSGSPGSRTRRPY
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgtggacgtcccaatggaggacgagatcatcgcttccacggagtgcaacggt
ggccctacagactatacgtcagagtttgtgattccaatcgatgttttcccaacccctaac
atggcgcatctgccaaagaacgcgcaattgccaccctacggtccgtccaagagcgtgtcg
tcgatgcgtccaacatcccgcgatgaccgctcagacaaaatggaccttgtaagaaccact
ccgcatcgacgtgcaagcccacaagtacggataccgcccaaacctagatcacaggctctg
ccatacgcaactttaaagacaggcttggtttacgatcctcgtatgcggtttcatgccgag
cttcctagcgacacctcggtggacgaaatacaccctgaagatccacggcgcatccactct
atcttcgaggagattcgggaagctgggctcgtgcgtgggccagaaagttcagacagcgac
gaaaatgacgagtattgttggagaattggtattcgatacgccgaggaacacgaaattctg
acgattcatacaaaagcccattatgactttgtatattcattacagagcatgcctgaagag
gagatgcatgaatggatggataaattggactcgatctatttcaaccactctacttatgat
tgtgccagactagcagcaggcggcgcaattgaggcgtgcaaagctgtcgtgcagggatct
gtgcgcaacgcgatcgctatcatcagacccccagggcatcacgccgagagttcccaacct
tctggattctgcatcttcaacaacgttcctattgcaacacgtgtgtgtcaagatgcatat
ccgcagacctgcagaaaggtactgattctggactgggacgtccatcacggcaatggcatc
cagcacgcgttctacgacgacccaaatgtgctctacatatctttgcacgttttccgcaac
ggtcacttctatcccaacctacctgacggcaaccttgacttttgtggagagggtgatgga
attggaaagaacgtcaacatcccgtgggatgatcatgctatgggcgatgctgagtatctc
tatgcctttcaagaagttgtcatgcccatagccagcgagtttgatccggacttggtaatc
atctcggctggctttgatgctgctgaaggggacgtgctcggcggctgctttgtcactccg
gcttgctatggtcacatgacacacatgctgtcgcgcttggcgaagggtaagcttgtggtg
tgtcttgaaggaggctacaacttgcgctcaatcgctcgttctgcacttgcggtgaccagg
gtattgatgcaagagcccccggaccgactaagtgaagacttgcccgcgccaaaagatagt
gctgtccgtaccatcgaacaggtcaagcatcagcactcgaagtattggaaatgcctgtat
cccaaaaaacttgaaaggactgatccgggatttgccgctacagacgcgttgcataatgtt
ataagagaatggcaaagccaacgtctggccagagagcactgcatgacacctctgcctttg
cagatcaaccaccctgaccttgcaccgacgttcgagcacaatgtgattgcaacgcctgac
tttatggaacgcaggccgcttctggtgatcttccacgatccgcccagctttcgagatcac
ccggacccagtcacaggacgaagagaactgcacaacacatggcttactgatgtaagcaag
agctatatcgactgggccataacaaatggtttctccgtcatcgacgtgaacgttccccat
atcgtcaccgtagagcagcaagaagggtcaagcttaggcttcgccagcgcagatgatgcc
aaagctcggtctgacaaaacccgcgaaatggccaactacctttggacaaactacattcac
cccagcgacgcaactcaagtcttcttcatggggataggcgatgcttatcagggcctggtt
gacttgttgggccgcaatgaaactaccacagatgaggatagtaggatagagattctcata
ggatttgtggctgaatcgtccatacagtccgtcaagcgtcctacagatgatgacatagga
gcctggtattactaccacaccaagatcttcgtgaagcagagccactacgccttcagtcga
aactcgaaaaagaaactacgcaagaagctggggaatctccagcagtcggactgggacaca
ctggacgagatgctgatgggccaccgggatgaagtgcaggagctgctgctagagaagaag
agcgagtttgcggaggaaactgaaacctctactcctactgacgacgaccaacaggcggca
caaaacggtgggtttcgaagccctcctctaggcctcgacacgcaagccatagaagcgcgg
cacgctaatgggctacgaggtctaccgcctcttggtgtcttctcaagtccaaagcccagt
ggaagtccagggagtcgaacgaggaggccgtattga
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