Ascochyta rabiei: EKO05_0008864
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Entry
EKO05_0008864 CDS
T09445
Name
(RefSeq) RNA helicase
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0008864
Enzymes [BR:
arab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EKO05_0008864
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
90S particles
Helicases
EKO05_0008864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
HA2_C
HA2_N
DEAD
OB_NTP_bind
AAA_22
AAA_19
nSTAND3
PhoH
T2SSE
AAA_24
Motif
Other DBs
NCBI-GeneID:
62217050
NCBI-ProteinID:
XP_038796390
LinkDB
All DBs
Position
15:complement(1365674..1369405)
Genome browser
AA seq
1243 aa
AA seq
DB search
MPKFVPRQRKHKVVARQKPAHNDEPSEANTEQILPAEQRERDERRRAMKDDLVRESQSKM
SGKKKKRLDKYIDTKLKKEENLELLKKLASQSHKVDTSLFQSSKKLGSGGDTKREALRRA
LAERRAGIDVEKNEGLLFEEHTVREPEAESSGSEDDNNTQAAPRTSSKSTKTSTTSQRKR
GRSLSKSPEPTYSAPSEPATTSVGSFGLFGGGLKRPLEVDESGKPVIQVRKRRKAKGKPI
AIEEEVAWEGFSSDEKEAEEADADSVEAAESTEESDIEEDEEGTDSGSEDSEGSEEEDSE
EDSDSDSESSLDEESKIARKERTSAFKAWATSQRNEQVGFVPTNQLEHTIPAKPINFTPR
APEQDPLPRELQTNTATDATRKAYSVAVERSPEIQEARMQLPVVAEEQKIMEAIHNNDVV
VVWGATGSGKTTQVPQFLFEAGYGAPDGPTPGMIGVTQPRRVAAVSMSKRVGDELGDHGS
KVAHQIRFDTTTNAKTAVKFMTDGVLLREITQDFILSKYSAIVIDEAHERSVNTDILIGM
LSRIVDLRAEMAKENPKVKPLKLVIMSATLRISDFTENKRLFRSEPPPLLKAEGRQYTVT
NHFARQTQRDYVEEMYRKVVRGHRKLPQGAMLVFLTGQGEIANLAKRLKQAFPSTQGQDA
KTGKVRINPAEAPVETEDLEFGAENNDEDNDGSDSEDSVIMGLDDDEEDKEFDIDEEKPE
DTVMNVHVLPLYSQLPTNQQMRVFEPPPEGSRLIVLATNVAETSLTIPGVRYVFDCGRAK
EKKYDLITGVQSFEIGWISKASANQRAGRAGRTGPGHCYRLYSSAVFERDFEEYAAPEIS
RTPLEGVVLQLKSMGAPVVNFPFPTPPDRESLQRAENLLSYLGALSSDGKVTKLGHELSL
YPLNPRFARMLAMGVAQNLTAETIALVAALSVPELVVPENKLGLREPPKDPDAVRTEQDN
IEAEERSQLRKAYNAALAKLSVNAKQSDCIKFSNAVCAYAYESDPQRFCEDMFLNAKAMH
EASQLRQQLTSIVRTHRPTAIGAYQPKLPAPSEKSISLLIQICAAGFIDQVAMRADLAPV
PPELSRKPKTAIDVPYITLFSSNDSRSDDPNEKYVYLHPSTLLARTPPAKLPGYIIYSHL
QRASTSVINGAKTPKTRMHPLTPVTRPQLINIALGTPLLQASKPKGKIAELPRTSGAPER
RECEVEMSLLGEKGSQGWGLGVRKVVQRKEGAGRGWVVEKVLA
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaattcgttccgcgacagcgtaaacacaaggtggttgcgcgccagaagcctgct
cacaatgatgagcccagtgaggccaacacggagcaaatcctgcctgctgagcagcgagag
cgtgatgagaggcggcgcgctatgaaagatgacctggtgcgcgagtcgcagagcaaaatg
agcggaaagaagaagaagcgcctggacaaatacatcgatacgaagctcaagaaggaagaa
aacctggagctcctcaagaaattagcctcgcaatcgcacaaggtcgacaccagtctgttc
cagagctcaaagaagctgggtagtggcggcgacaccaagcgtgaagctctcagacgagcg
ctggccgagcgtcgagctggcatagatgtggagaagaacgagggactgctgttcgaggag
cacactgttcgagaaccagaagctgagagctcggggtcggaggacgacaacaacactcag
gccgcgcctaggacgagttcgaaatcaacgaagacctctaccacctcacaacggaaacgg
ggtcggtcgctttcgaagtcacccgaaccgacttactcggcgccctctgagcctgcaacc
acgtcagtcggcagctttggtctgtttggaggcggtctcaagcggccgctcgaggttgac
gaatcaggcaagccagtcatccaggtcagaaagcgcagaaaggcaaagggcaagcctatc
gccattgaggaagaggtggcgtgggaaggattcagctccgacgagaaagaagccgaagag
gctgacgctgatagcgtagaggcagcagagtcgacagaagaatcagatattgaagaagac
gaggagggcacagactctggatcagaggattcggaagggtcagaagaggaggactcagaa
gaagacagtgatagcgacagcgaaagcagcctcgacgaggaaagcaagatcgctcgaaaa
gagcggacatcagccttcaaggcatgggccacgagccaaagaaatgaacaagttggcttc
gtaccgacgaaccaactcgaacacacgataccagcgaagcctatcaacttcacaccgaga
gcgcccgagcaagatcccctcccccgggagcttcagacgaacacggcgaccgacgcgaca
agaaaggcatacagcgtcgctgtggaaagatcaccggagattcaagaggctaggatgcag
cttccagtagtggccgaggaacagaagattatggaggcgatacacaacaacgacgtggtc
gtggtctggggagctactggtagtggtaagaccacacaggtgccgcagttcctcttcgag
gcaggctatggtgcgccagatgggcctacaccaggcatgattggtgtcacacagccacga
cgtgtcgctgcagtcagcatgtcgaagcgcgttggtgatgagctcggcgaccacggctcg
aaggttgcccatcagattcggttcgacaccacgacgaacgcgaaaactgcggtaaagttc
atgacagatggtgtgcttctgcgcgagatcacacaggatttcatactatcaaagtattcc
gccatcgttatcgatgaggcccacgagcgcagtgtcaatactgatatcctcattggtatg
ctcagcagaatcgtggatctgcgagctgagatggcaaaagaaaaccctaaagtcaagcct
ctgaagctggtaatcatgtcggccacactcagaatctcagatttcactgagaacaagcgc
ctgttcaggagtgaaccaccccctttactcaaggcggagggtcgccagtacacagtcacc
aaccactttgcccgccagacccagcgcgactacgtcgaggagatgtatcgcaaggtcgtc
agaggacatcgtaagctgccacaaggagcaatgttagtcttcctcacgggtcaaggcgag
atcgcgaacctcgcgaagcgcttgaagcaagccttcccatcgacacaaggacaggacgca
aagaccggcaaggtccggatcaatccagcagaggcgcccgtggagactgaagacctcgag
ttcggcgcagagaacaacgatgaggacaacgatggttctgactccgaggactctgtcatc
atgggtttggatgacgacgaagaggataaggaattcgatattgacgaggagaagcctgag
gacactgtgatgaatgtgcacgtattgccactctactcgcaacttcctacgaaccagcaa
atgcgcgtctttgaaccgcccccggagggatctcggctcattgttttggcgactaatgta
gcggaaacgagtttgacgatccctggcgttcgttacgtcttcgactgtggaagagcgaag
gagaagaagtatgacctcattacgggtgtacagagcttcgaaatcggctggatcagcaag
gcaagcgccaatcaaagagctggtcgtgctggtcgtaccggtcctggtcactgctaccgt
ctatactcatccgcagtcttcgaacgtgatttcgaagagtatgcagcgccagagatttct
cgaacgcctctagagggagtggtcctacagttgaagagcatgggtgcgcctgtggtcaac
tttccattccctacaccgccagaccgagaaagccttcagcgcgctgaaaaccttctctcc
tacctcggagcgctgtcgtccgacggcaaggtgaccaagctgggacacgagctctcgttg
taccctctcaacccccgttttgcgcggatgttagctatgggtgttgctcagaacctcacg
gctgagaccatcgctctggtagctgcgttatccgtaccagagcttgtcgttccagagaac
aagctcggcctccgggaaccccctaaagacccagatgctgttcgcacagaacaggacaat
attgaggctgaagagcgttctcagttgcgtaaggcttacaacgccgccctcgccaagttg
agtgtcaacgcaaagcaaagcgactgcatcaagttcagcaacgctgtctgcgcttacgcg
tacgagagcgatccacagcgtttctgcgaggacatgtttctcaacgccaaagccatgcat
gaagccagccagctccgccagcagctgaccagcatcgtacgcacgcatcgcccgactgca
attggcgcataccagcccaagcttccggctccatcagagaagagcatcagcctactgatc
cagatctgcgcagcaggcttcatcgaccaagtcgccatgcgagcagatctcgctcccgta
ccaccggagctgtctcgcaagcccaagaccgccattgacgtcccctacatcaccctcttc
tcatccaacgattcacgcagcgacgaccccaacgagaaatacgtctatctccacccctcg
actctcctcgcacgaacaccgccggcaaagctgccgggatatatcatctactcgcacctc
cagcgcgcatctacatccgtcatcaatggcgcaaagacgccgaaaacacgcatgcacccg
ctcacgcctgtcacgcggccccagctcatcaacattgccctcgggacaccgctgctgcag
gcttcgaagccaaagggcaagatcgcagagttgccgcgcacgagcggtgcgccagagcga
cgggagtgcgaggttgagatgtcgctccttggcgagaagggaagtcaaggctggggattg
ggagtgaggaaggtggtgcagcggaaggagggtgctgggagggggtgggtggttgagaag
gttcttgcttga
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