Ascochyta rabiei: EKO05_0008889
Help
Entry
EKO05_0008889 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K15560
protein NRD1
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0008889
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EKO05_0008889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrd1-Seb1_dom2
CID
RRM_1
Motif
Other DBs
NCBI-GeneID:
62217075
NCBI-ProteinID:
XP_038796415
LinkDB
All DBs
Position
15:complement(join(1434365..1434606,1434657..1434861,1434907..1435946,1435997..1436342,1436420..1436536))
Genome browser
AA seq
649 aa
AA seq
DB search
MAAMTELDALLQSLQALKAPGVTPTKVKAITAICVENIQSDSAIIQKILQQFQNSAATHK
LGVLYVVDSVTRQWVEKSKAAGQSVSRNAAPGTYAAGVQKMTDVLPAVMNDLVQHVPDNQ
REKITKLLDIWQRGHTFPLDMLAKFKQQVNGRQHNAQTAQPSPPKGNSSGPARHAQTNPQ
QTAAPAPPTVQKPQDPGALLAALSGYGQQPGQTGPSAGLPFLPNMVPPPPPPGFVPPPPP
AASLQPAMPPPPPAGMNDLANQILQAMSAGSIAPDQAIQVLNALAAAQNGGASLPPAPPQ
VAPPALPQAPVAMPNGGQARFEHNDTKMRDRSRSPDYTRRASPSRRSPPNRRESPVYGSY
DPNAVGDGSASNRNERGRGRGKARGGRSDRNEYRQRTPPGQRRQPSPPKDVYGQSRYIEW
DPSLPRDNIRVLSRTLFVGGAGGTEGEIRAIFSRFGRVQTCIVNQDKRHAFVKMLTRPDA
VAAKEGMDSLQDPAAQSKARQTRWGVGFGPRDCSDYNSGISVIPISRLTDADRKWALTAE
HGGTGGRPLEGGMVLEEPDIEIGAGVSSKAISRRVPTDGGRGGRSGFGNGHGNGNHHRGA
VDNSQAKLRKQEQRPAHDPRHVSPRAEQGVAVPPAVPGFGFQLPGFLAR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggctatgactgagttggacgcgctgttgcaatcgctccaagctttaaaggcaccc
ggcgtaacccccaccaaggtcaaggccatcaccgcgatatgcgtagagaacattcagtcc
gattcggccatcattcagaagatcctccagcagttccaaaacagcgccgccacacataag
ctcggtgtgctatacgttgtagattccgtcacgcgccagtgggtagaaaagtcaaaggcc
gccggtcagtcagtctccagaaatgccgcgcccggaacctatgctgcgggcgtgcagaag
atgacggatgtgctgccggccgtcatgaacgaccttgtccaacacgtcccagacaaccag
agggagaagattaccaaactcctagacatctggcagcgtggacacacattccctctagac
atgcttgcgaaattcaagcagcaggtgaacggccgtcagcataatgcccagaccgcgcaa
ccgagtccgccaaagggtaacagctccggcccagctcgccatgctcagactaatccacag
caaacagccgctcccgcgcctccgactgtgcagaagccacaggaccctggtgcgctactt
gcagccctctccggctatggccagcagcctggtcagactggcccatctgccggtcttccc
tttctaccaaatatggtgccgccgccgcctcccccaggatttgtgccgccgccgcctccc
gcggcaagcctacagcccgcaatgccgccccctccgccggccggtatgaatgacctggcc
aatcagatattacaggctatgagtgcaggttccatcgcgccagaccaggctatacaagta
ctaaacgctttggcggcagcacagaacggaggggcatcgctgccacccgcgccgccccag
gtggcacctccagcgctcccacaggcgccggtcgccatgccgaatggcggccaagcgcgt
tttgagcacaacgatactaagatgcgagaccgtagcagatcgccagactatacccgtcgt
gcttctcccagtcgtagatccccgcccaaccgtcgcgagagtcctgtgtacggttcctac
gacccgaatgctgttggtgatggtagtgcgtcgaaccgcaatgagcgcggccgcggtcgt
ggtaaggcgcggggtggtcgtagtgaccgtaatgagtatcggcaacgtacgccgccgggg
caacggcgacagccaagtccgcccaaggacgtgtatggtcagtcgcgttacatcgagtgg
gacccaagtctgccgcgcgacaacatcagggtattgagtcgtaccttgttcgtaggcggc
gcgggcgggacggaaggtgagatccgcgccatcttcagccgctttggtagggtccagaca
tgcattgtgaaccaggacaagcgacacgcgtttgtcaagatgttgacacggcccgatgct
gtggcggccaaggaggggatggacagcctgcaggaccctgccgcgcagtccaaggctcgc
cagacacgatggggcgtcggcttcggaccacgcgactgcagtgactacaacagcgggatc
agcgtgattcccatctcgcgactcacagacgccgaccgcaagtgggctctgacggccgag
cacggcgggacaggcggccgaccgctcgaaggcgggatggtgttggaagagcccgacatt
gagattggggcgggtgtgtcgtccaaagcgatcagtagacgcgtgcccacggacggcggg
cgcggcggacgcagcggcttcggcaacggccacggcaacggcaatcaccatcgcggggcc
gtggacaacagccaggccaagttgcgcaagcaagagcagcggccggcccacgatccgcgg
cacgtctccccgcgcgcagagcagggcgttgcggtgccgcctgcggtgcccggcttcggc
tttcagctgccggggtttctggcgaggtga
DBGET
integrated database retrieval system
