Ascochyta rabiei: EKO05_0008973
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Entry
EKO05_0008973 CDS
T09445
Name
(RefSeq) Vacuolar protein sorting-associated protein 20
KO
K12195
charged multivesicular body protein 6
Organism
arab
Ascochyta rabiei
Pathway
arab03250
Viral life cycle - HIV-1
arab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EKO05_0008973
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
EKO05_0008973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0008973
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arab04147
]
EKO05_0008973
Membrane trafficking [BR:
arab04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
EKO05_0008973
Exosome [BR:
arab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EKO05_0008973
Exosomal proteins of other body fluids (saliva and urine)
EKO05_0008973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
IL34
Motif
Other DBs
NCBI-GeneID:
62217155
NCBI-ProteinID:
XP_038795588
LinkDB
All DBs
Position
16:join(200824..200867,200915..201278,201337..201570)
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AA seq
213 aa
AA seq
DB search
MGNSGSSNKISAQDKAILDMKNQRDKLRQYQKRITVLTDREKAIAKECLAKGDTNRAKLA
LRRKKYQEGLIQKTDAQLAQLEQLTSDVEFALVQKDVLYGLQQGTAVLKEIHREMGGIEN
VEKLLGENAEARAYQEEISELLANKMSNQDEDEVEDELEALEQEVNGDTLPDAPIKQPEF
TPEQKAQMARERAQRRARERAAEQEQAAEPMLA
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggggaactcaggcagctcgaacaagatctctgcccaggacaaggcgatcctggacatg
aagaaccagcgcgataagctgcgccagtaccagaagcgcatcactgtgctgaccgatcgc
gagaaggcgattgcgaaagaatgcctagccaagggcgatacaaatagagccaagctggcg
ctcagacggaagaagtaccaagaaggtctgatccagaagacggatgcgcaactagcgcag
ctagagcagctcacgagcgatgtcgaattcgcgcttgtgcaaaaggatgtgttgtatggg
ttgcagcaaggaactgcagtgctgaaggagatccacagagagatgggcggcatagagaat
gtggagaagctgctgggcgaaaatgccgaggcgcgggcataccaagaggaaatcagcgag
ctccttgcgaacaagatgtccaaccaagacgaagacgaagtcgaagacgagctcgaggct
ctcgaacaagaagtcaacggcgacacgctgcccgatgcacccatcaaacaacccgagttc
acgccagagcagaaagcgcagatggcaagagaacgggcacaaagaagggctagagagcgt
gctgctgagcaggagcaggcggcagaacccatgttggcatag
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integrated database retrieval system
