Ascochyta rabiei: EKO05_0009046 Help Entry EKO05_0009046     CDS       T09445                                  Name (RefSeq) pre-mRNA-splicing factor syf1   KO K12867   pre-mRNA-splicing factor SYF1 Organism arab  Ascochyta rabiei Pathway arab03040   Spliceosome Brite KEGG Orthology (KO) [BR:arab00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     EKO05_0009046  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:arab03019]     EKO05_0009046    03041 Spliceosome [BR:arab03041]     EKO05_0009046 Messenger RNA biogenesis [BR:arab03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      EKO05_0009046 Spliceosome [BR:arab03041]  Complex B   Other components    Prp19-related factors     EKO05_0009046  Complex C     EKO05_0009046 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_2 TPR_8 ARM_TT21 RPN7 Motif Other DBs NCBI-GeneID:  62217228 NCBI-ProteinID:  XP_038795661 LinkDB All DBs Position 16:join(430984..433292,433342..433579) Genome browser AA seq 848 aa AA seqDB search MTAQILASTTAPAPAPPPATAPTAPARPSKRRMDRPPELFLITDQDGAYEDDIQRNPGSV KPWLDYFAFKRARGSLVEQAFVLERAVTSLPRSYKLWKLYLDLRTRHLAHRNPAKFAPHF LKVNSLFERALVLLNKMPRIWELYLAFLMQQPLVTTTRRTFDRALRALPLTQHSRIWALY RPFAASASGETAVSIWRRYMQIHPEHAEDFIELLKDMRKYTDAVTQYMHILNNPRFKSKH AKAPFHFWSEMMDLIIDHAADIDTSDDSGIDVEKITHSGIAKFPDQRGILWVGLARYWMH KAEYEKARDVFERAITTVMTVRDFSLVFDTYVEAEEAMIGLKLNDAAARSEMRTPDPAAD ADLDIRIVRFESLMQRRPFLLNDVLLRQNPHNVIEWEKRVALWGDNKKEVVHTYTDAIAA IHPKKAVGKFHELWANYARFYEAVGSLHNARAIMEKAVKVPFKSVAELAEMWCEWAEMEL RNQNFDKAVDIMAKATQAPKRSNVDYFDESLTPQQRVHKSWKLWSFYVDLVESVSTLDET KKVYERIFELRIATPQTVVNYANLLEENQYFEDSFKVYERGLDLFSYPVAFEIWNLYLTK AVDRKIGMERLRDLFEQAVEGCPPKFAKVLYLMYGALEEDRGLARHAMRIYERATRAVAD EDRMDMFNFYITKSASNFGLTSTRPIYERAIAALPDGEAKEMCLKFAEMERRLGEIDRAR AIYGHASQFCDPRTSPEFWKKWEGFEVSHGNEDTYKEMLRIKRSVQAQYNTDVNFIASQA IARGQANGNTEAGAENDAAAGEDAMAALERQARAPAGFVAATTGLKGNIAPTEHAAANPD AIDLDDDL NT seq 2547 nt NT seq  +upstreamnt  +downstreamnt atgaccgcccagatcctggcctcgacgaccgcgcccgcgcccgcgcccccgcctgcaaca gcacccacggcgcccgcccggcccagcaagcgcaggatggaccggccgcccgagctcttc ctcataaccgaccaggacggcgcgtacgaggacgacatccagcgcaaccccggcagcgtc aagccgtggctcgactacttcgccttcaagcgcgcgcgcggcagcctcgtcgagcaggcc ttcgtcctcgagcgcgccgtcaccagcctgccgcggtcctacaagctgtggaagctgtac ctcgacctgcgcacccgccacctcgcccacaggaaccccgccaagttcgccccgcacttc ctcaaggtcaattccctcttcgagcgcgccctcgtcctgctcaacaagatgccgcgcatc tgggagctctacctcgccttcctcatgcagcagcccctcgtcaccaccacccgccgcacc ttcgaccgcgccctccgcgccctgcccctgacccagcacagccgcatctgggccctctac cgcccctttgccgcctccgcctcgggcgagaccgccgtctccatctggcgccgctacatg cagatccaccccgagcacgccgaggacttcatcgagctgctcaaggacatgcgcaagtac accgacgccgtcacccagtacatgcacatcctcaacaacccgcgcttcaagagcaagcac gcaaaggcgcccttccacttctggtccgagatgatggacctcatcatcgaccacgccgcc gacatcgacacctccgacgacagcggcatcgacgtcgagaaaatcacccacagcggcatc gcaaagttccccgaccagcgcggcatcctgtgggtcggcctggcccgctactggatgcac aaggccgagtacgaaaaggcccgcgacgtcttcgagcgcgccatcaccaccgtcatgacc gtccgcgacttctccctcgtcttcgacacgtacgtcgaggccgaagaggccatgattggc ctcaagctgaacgacgccgccgcccgctccgagatgcgcacccccgaccccgccgccgac gccgatctcgacatccgcatcgtccgcttcgagtcgctgatgcagcgccgacccttcctg ctcaacgatgtcctcttgcgccagaacccgcacaacgtcatcgagtgggagaagcgcgtc gccctctggggagacaacaagaaagaggtcgtccacacctacacagacgccatcgctgcc atccaccccaaaaaggcagtcggcaagttccacgagctctgggccaactacgcaaggttc tacgaagccgtcggcagcctccacaacgcccgtgccattatggaaaaggccgtcaaggtc cccttcaagtccgtcgccgagctggccgagatgtggtgcgagtgggccgagatggagctg cgcaaccaaaacttcgacaaggcggtcgacatcatggccaaggcgacccaggcgcccaag cgatccaacgtcgactactttgacgagtcgctgaccccgcagcagcgtgtgcacaagagc tggaaactgtggagcttctacgtcgacctcgtcgagagcgtcagcaccctggacgagaca aagaaggtgtacgagaggatcttcgagctccgcatcgccaccccgcagacggtcgtcaac tacgccaacctgctcgaggagaaccagtactttgaagacagcttcaaggtctacgagcgc ggcctcgacctcttcagctacccagtcgcctttgagatctggaacctgtacctcacaaaa gccgtggaccgcaagatcggcatggagcgcttgcgcgacctcttcgagcaggccgttgaa ggctgcccgcccaagttcgccaaggtcctgtacctcatgtacggcgccctggaggaagac cgcggcctcgcacgccacgccatgcgcatctacgagcgcgccacccgcgccgtcgccgac gaggaccgcatggacatgttcaatttctacatcaccaaatccgcctccaacttcggtctc acctccacccggcccatctacgagcgcgccatcgccgcgctcccagacggcgaggccaag gagatgtgtctcaagttcgccgagatggagaggcggctgggtgagattgaccgcgcgcga gccatctacggccacgcctcacagttctgcgatcccaggacgagccccgagttctggaag aagtgggagggtttcgaagtctcgcacggaaacgaagacacctacaaggagatgctgcgc atcaagcggagcgtccaagcacagtacaacacggacgtcaacttcatcgcctcccaagcc attgcgcgcggccaggccaacggcaacacagaagccggtgcagaaaacgacgcagccgcc ggcgaagacgccatggcagcgctggagcgccaggctcgcgctcccgctggcttcgtcgcc gcgaccacgggcctgaagggcaacattgcacccacggaacacgccgccgcgaatccggac gcgatcgatctcgacgacgatctatag

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