Ascochyta rabiei: EKO05_0009133
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Entry
EKO05_0009133 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K10610
DNA damage-binding protein 1
Organism
arab
Ascochyta rabiei
Pathway
arab03420
Nucleotide excision repair
arab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EKO05_0009133
09124 Replication and repair
03420 Nucleotide excision repair
EKO05_0009133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arab04121
]
EKO05_0009133
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0009133
Ubiquitin system [BR:
arab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
EKO05_0009133
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
EKO05_0009133
TCR (transcription coupled repair) factors
Cul4-CSA complex
EKO05_0009133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
EIF3I
Motif
Other DBs
NCBI-GeneID:
62217306
NCBI-ProteinID:
XP_038795739
LinkDB
All DBs
Position
16:join(636641..636735,636784..639781,639835..640134)
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AA seq
1130 aa
AA seq
DB search
MAYIVPIHKPSSVRHALKLNFLTADEDCLVVARANRLEFYSQTTDGLALQHSKAIYGKVT
MLQKLRPALSQTDHLFVGTDRFTYFTLSWNPEKKQLQTEKSFESVADNAARESQTGERCH
VDPTGRLMTVEVYEGIITVIPLVQRGKKRKQAGQSDIAHLGEPVPVRLAEMFVRSSAFLR
PSSIDENPKIALLYEDTHSQVKLKVREIKHSGDEVELEEGDVCKADIELGSSHLIPVEEP
SHGLIVIGETSIGYYNDVSGELQTEPLEEATIFVAWERVDSQRFVLADDYGRLYLFMLIL
DEKNRVQSWKLDVIGQTSRASVLVYLDAGYVFVGSHQGDSQVIRIAEKSMEIVQTFSNIA
PVLDFTIMDMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVGLEDVGLLGEME
HISNLFSLKSNPASDHVDTLMVTFVNESRIFKFDPQGEVEEFEEFASLALDEPTLAAANI
SQGRVVQVTNGRARICDLDGGMVQSEWMPFGGQQITAAAINDSHVLVSLGGVTVVSLTLL
APPHRVGPSMADGGLQVIKEKTFGTESQVACVALPSGSSPVCFIGFWKESGLAICSLDTL
EPVKTVQISEDSVPRSLLLTQIFPGQPPTLFAALADGNVVTYSFDPSTNELSGRKSIVLG
TREATFCALPRGDGLFNVFATCEHPSLIYASEGRLVYSAVTAEKATTVCPLDSEAYPGSV
AIATSGDLRIALVDTERTTHIQTLKVDETVRRIAYSSNLKAFGLGTIKRVLKGGEEFMIS
HFKLVDEIQFKELDTYPLNEEELLECVIRCSLPDGSGGMAERFILGTAYLDEQQATEERG
RILVLEVTPERSLKLVTSLAVKGGCRCLAICDGKIVAALIKTIVVYNLEFRTQSKPDLVK
AATFRCSTAPIDITVNGNVIAIADLMKSLVIVEYKRGEDGLSDKLAEVARHYQTTWATAV
AEVDANTYLESDAEGNLAVLERNPEGVTDDDKKRLQCTSELLLGEMVNKIRRIDVMAQAD
AVVVPRAFMGTVEGSIYLFGLIQPAYLHLLMALQSQLGKLVPAPGNMDIARYRAFKNQVR
ESEEPYRFVDGELVEKFLDLSEEDQKKACSELEGDVEEVKALVEGLRRLH
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcatacattgtacccatccacaagccgagcagcgttcgccatgccctcaaactcaac
ttcctcactgcagacgaggactgcttggtagtcgccagagcgaacagactcgagttctac
tcccagaccaccgatggactggcgctccagcactccaaagccatatatggcaaggtcacc
atgcttcagaagctccgcccagcactgtcacagaccgatcacctctttgtcggaaccgat
cggtttacatacttcaccctgtcgtggaaccccgagaagaagcaattgcagaccgaaaag
tcgttcgagagtgttgccgacaatgcggctagagagtcgcagactggggagagatgtcac
gttgaccccaccggacgactcatgacggttgaggtgtacgagggcatcatcactgtcata
cctctagtacagagaggcaaaaagaggaagcaagctggacaatcggacatcgcccatctc
ggagagcccgtgcctgtcaggttggccgagatgtttgtccgctcatcagccttccttcgg
ccgtcatcaatcgacgagaaccccaaaatcgccttactctacgaagacacacactcccag
gtcaagctcaaggtccgagaaataaagcatagcggagacgaggttgagctagaagaaggt
gatgtttgcaaagcagacatagagcttggttccagccatctaataccagtggaggagccg
tcacatggcttgatagtaattggcgagacgtccattggatactacaacgatgtctctggc
gagctacagaccgagccgttggaggaagccacgatttttgtcgcctgggagagagttgac
tcgcagcgcttcgttctcgccgacgattatggacgcttatatctcttcatgcttattctg
gacgaaaagaatcgagtccagtcatggaaactcgatgtcattggccagacctcacgggcg
tctgtgctggtctacttagacgccggatacgttttcgttggctcccatcaaggcgattcc
caggttattaggattgccgagaagtcaatggagattgtgcagaccttttccaacattgct
ccggtactcgacttcaccatcatggacatgggtaacaggtcaggcgagggacaaacaaac
gagtattcctctggccaggctcgaattgtcactggcagcggcgcctatcaagatggcagc
ctccgaagtgttcgcagtggtgtagggctggaagacgttggcctcctcggcgagatggaa
cacatttccaatcttttcagcttgaagtcaaaccctgcatctgaccatgtcgacacactc
atggtcacttttgttaatgagtcgcgcatcttcaaattcgatcctcagggtgaggtcgaa
gaatttgaagaatttgcttcgctcgccctcgatgaacccacgctcgctgcagccaacatc
tcccaaggacgagttgtgcaagtaactaacgggagagctcgaatctgcgatctggacggc
ggcatggtgcagtcggaatggatgccctttggtggtcagcaaatcacagcagcggccatc
aatgacagccacgttctggtttctttgggtggtgtcacagtggtttctctcacattacta
gctccaccacatcgtgtaggaccatcgatggcggatggcggtctccaggtgatcaaagag
aaaacatttggaacggagagtcaagttgcttgcgtcgcactaccatctggctcgagtcca
gtgtgtttcattggattctggaaagaatccggtcttgccatctgctcattggacacactg
gaacccgtcaagaccgttcagatttcagaagattcagtcccacgatcgttactactcacg
caaatcttccctgggcaaccacccactttgttcgctgcgttggcagatggaaacgttgtg
acatattcgttcgacccgtctaccaacgagctgtccgggcgaaagagtatcgtgcttggg
acacgcgaggccacattctgtgctttgcctcgtggtgacggtctcttcaacgtattcgca
acgtgtgagcatccctcgttgatctacgcgtcggaaggtcgtctggtctactctgcagtc
acagctgagaaagcaacaacggtgtgcccactcgactcggaagcttatcctggctctgta
gccattgcaacatcaggggaccttcggatagccctcgttgacaccgaaaggacgactcac
atccaaacactcaaggtcgacgagaccgttcgccgaatagcatattcgtcaaacctcaaa
gccttcggtctcggcaccataaagcgtgttcttaagggtggagaggaattcatgataagc
cacttcaagctcgttgacgagatccagttcaaagagctcgacacttacccactgaacgaa
gaggagcttctggaatgtgtaattcgctgctccctccctgacggttctggcggaatggcc
gaacgcttcatactcggcaccgcctacctcgatgaacaacaagcgaccgaagagcgcggg
cgcatcctcgtcctcgaagtaacgcctgagcgctctcttaaacttgttacctcgctcgct
gtcaagggtggctgtcgctgcctcgcaatctgcgatggcaagatagtcgcagcactaatc
aagaccatcgtagtatacaacctcgaatttcgaactcaatcgaaaccggacctcgtcaaa
gccgcaaccttccgctgttcaacagcacccatcgatatcaccgtcaatggcaacgtaatc
gcaatagccgacctgatgaaatcgcttgtcatcgtagaatacaaacgtggcgaagatggg
ctcagtgacaaactcgccgaagtcgcgcgccattaccagacaacatgggccacagccgtt
gccgaagtagacgcgaacacataccttgagagcgatgcggaaggtaacctggcagtccta
gagcgcaaccccgagggcgtaacagacgatgacaagaagaggctgcagtgcacatcggag
cttttgcttggtgagatggtaaacaagatacgcaggatcgacgtcatggcgcaggccgat
gccgtcgttgtaccgcgagcttttatgggaactgtggaagggtcaatctacctctttggg
ctgatccaacccgcatacctccaccttctcatggccctgcagagccagctaggcaaacta
gtgcctgcaccaggcaacatggatattgcacggtaccgagctttcaaaaaccaagtccgg
gagtccgaggagccgtatcgcttcgtagacggcgagctggtcgagaaattcctggacctg
agtgaggaagatcagaagaaagcatgtagcgaattggagggcgatgttgaggaggtaaag
gcgttggttgagggactgcgacggctgcattag
DBGET
integrated database retrieval system
