Ascochyta rabiei: EKO05_0009326
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Entry
EKO05_0009326 CDS
T09445
Name
(RefSeq) RNA helicase
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0009326
Enzymes [BR:
arab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EKO05_0009326
Spliceosome [BR:
arab03041
]
Complex C
Other components
Complex C specific factors
EKO05_0009326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
AAA_23
AAA_16
nSTAND3
cobW
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
62217489
NCBI-ProteinID:
XP_038795922
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All DBs
Position
16:1195445..1197469
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AA seq
674 aa
AA seq
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MAEQEEFNPPIIPDLYKPPALLPIAQLKDQLLYTIETHPVTIIVGETGSGKTTQIPQYLL
NAGWCASGFQIAVTQPRRIAATSVAARVAEELETPLGQKVGYSIRFEDVTSAATQVKFVT
DGLLLREMLVDPLLKRYSVIMVDEAHERSLSSDVLLSLLKKVLRKREDLRVVVSSATLEA
ERFLDFFNPDEGEKVWGKSREEYGRIVGIQGRTHPVEVQYLAEPTNNYIDQAVEAIMDIH
ENEADGDILVFMTGREEIDDSIDMISDRVADLPSTKQKLMPLPLYAGLPTEEQMFVFQKA
PTNTRKVILSTNIAEASVTIEGIVYVIDSGYVKLRAYDARLGIENLNVVPVSRASATQRS
GRAGRTRPGKCFRLYTEQAFKNLEEATFPEIQRSNLAPVLLQLLNLGITNLIRFDYLSPP
PSALVTRALDLLYSLGALDNNARLTKPLGARMAELPLEPMLSRALLNAASPDFSCLSEML
SIAAMMTLQGNAFISHNDNKAQLEKARRRFAVSEGDHLSLYNVFTAFVQNGQNVQWCREN
CLNHKSLVKAVSVRKQLAAYLDRFGVKESALSVPDVLRVGGRPLAERVRRCLATGFFAHV
AKMKSDGSFSTVDGKTTLWAHPSSVFFHRKADWVIYTEILSTRDKIYIRDLSTVDMDWLA
EYAPEYYKVKDGRR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagaagaattcaatccaccaatcattccggatctttacaagccccctgct
ctcctcccgatcgcccaactgaaagatcaactcctctacacaatcgagactcaccctgtg
accatcatagtcggcgaaaccggcagcggaaagactacccagatacctcagtaccttctc
aatgctggatggtgcgcctctggatttcagattgctgtaacacagccgcgcaggatagca
gctaccagcgtagctgcgcgtgtcgcagaagagctagaaacgccattgggtcagaaggtc
gggtactcgatacgcttcgaggatgtcacgagcgcagctacgcaggttaaatttgtgact
gatgggctgttattgcgggagatgctcgtcgatccattgttgaagcggtattcagtcatc
atggttgatgaggcacatgagcgcagcctgagtagtgacgtgttgctgagtctgttgaag
aaggttttgaggaaaagagaagatctgagagttgtggtgagtagtgctaccttggaggcc
gagcgatttctggacttcttcaatccggatgaaggcgaaaaggtatggggaaagagcagg
gaagagtatgggaggatcgtaggtatccagggacgaacacatccagttgaggtgcagtac
ttggctgaacccaccaacaactacatcgatcaagccgttgaggccattatggatattcac
gagaacgaagcggacggcgacatcctagtcttcatgactgggagagaagaaattgacgat
tcaatcgacatgattagcgaccgggtcgcagacctgccttctacaaaacagaaactcatg
cccctccctctttacgctggtcttccaacagaagagcaaatgttcgttttccagaaagct
cccaccaacacccgcaaagtaattctcagcaccaacattgctgaagccagcgtaaccatc
gaaggcattgtctatgtcatagacagcggctacgttaaactacgcgcctacgacgctcgt
ctcggaatcgaaaacctcaacgtcgtccctgtctcgcgcgcctctgctacccaaaggtct
ggccgcgcaggccgcacacgtcccggcaaatgctttcgactgtacacagaacaagccttc
aagaaccttgaggaggccaccttccctgagatccaacgttcaaatcttgcacctgtcctt
ttacaacttcttaatctgggcatcacaaacctcatccgcttcgactacctctcaccccca
ccttcggcactcgtaacccgcgctctcgacctcttatactccctcggcgccctcgacaac
aacgcacgcctgacaaaacccttgggggcacgcatggccgaactgcccctggaaccgatg
ctgtcgcgcgcactcctcaacgctgcaagtcccgacttcagctgcctcagcgagatgctc
agcatcgccgcgatgatgaccttacagggcaacgccttcatctcgcacaacgacaacaag
gctcagctcgagaaagcccggcgccgctttgctgtctcggaaggcgaccatctgtcgctg
tacaatgtgttcacagccttcgtccagaacgggcagaacgtgcaatggtgtcgtgagaat
tgtctgaatcataagagtttggtcaaggcggttagcgtgcgtaagcagctagcagcgtat
ctggatcggttcggtgtgaaggagagcgcgctgtctgtgccagatgtactgcgggttggc
ggcagaccgttggcagaacgagtgaggaggtgtcttgcgacgggattctttgcgcatgtg
gcgaaaatgaagagtgatgggagtttctcgacagtggatgggaagacgacgctgtgggcg
catcccagttcggtgttcttccatcgtaaggcggattgggtaatctatacggagattctg
tcgacgagggataaaatttacattcgagatttgtcgaccgtggatatggactggttggcg
gaatatgcgccggagtactacaaggtcaaggatggacgaagatga
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