KEGG   Ascochyta rabiei: EKO05_0009326
Entry
EKO05_0009326     CDS       T09445                                 
Name
(RefSeq) RNA helicase
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
arab  Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:arab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arab03041]
    EKO05_0009326
Enzymes [BR:arab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     EKO05_0009326
Spliceosome [BR:arab03041]
 Complex C
  Other components
   Complex C specific factors
    EKO05_0009326
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 AAA_19 AAA_30 AAA_23 AAA_16 nSTAND3 cobW AAA_29 ABC_tran
Other DBs
NCBI-GeneID: 62217489
NCBI-ProteinID: XP_038795922
LinkDB
Position
16:1195445..1197469
AA seq 674 aa
MAEQEEFNPPIIPDLYKPPALLPIAQLKDQLLYTIETHPVTIIVGETGSGKTTQIPQYLL
NAGWCASGFQIAVTQPRRIAATSVAARVAEELETPLGQKVGYSIRFEDVTSAATQVKFVT
DGLLLREMLVDPLLKRYSVIMVDEAHERSLSSDVLLSLLKKVLRKREDLRVVVSSATLEA
ERFLDFFNPDEGEKVWGKSREEYGRIVGIQGRTHPVEVQYLAEPTNNYIDQAVEAIMDIH
ENEADGDILVFMTGREEIDDSIDMISDRVADLPSTKQKLMPLPLYAGLPTEEQMFVFQKA
PTNTRKVILSTNIAEASVTIEGIVYVIDSGYVKLRAYDARLGIENLNVVPVSRASATQRS
GRAGRTRPGKCFRLYTEQAFKNLEEATFPEIQRSNLAPVLLQLLNLGITNLIRFDYLSPP
PSALVTRALDLLYSLGALDNNARLTKPLGARMAELPLEPMLSRALLNAASPDFSCLSEML
SIAAMMTLQGNAFISHNDNKAQLEKARRRFAVSEGDHLSLYNVFTAFVQNGQNVQWCREN
CLNHKSLVKAVSVRKQLAAYLDRFGVKESALSVPDVLRVGGRPLAERVRRCLATGFFAHV
AKMKSDGSFSTVDGKTTLWAHPSSVFFHRKADWVIYTEILSTRDKIYIRDLSTVDMDWLA
EYAPEYYKVKDGRR
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggctgaacaagaagaattcaatccaccaatcattccggatctttacaagccccctgct
ctcctcccgatcgcccaactgaaagatcaactcctctacacaatcgagactcaccctgtg
accatcatagtcggcgaaaccggcagcggaaagactacccagatacctcagtaccttctc
aatgctggatggtgcgcctctggatttcagattgctgtaacacagccgcgcaggatagca
gctaccagcgtagctgcgcgtgtcgcagaagagctagaaacgccattgggtcagaaggtc
gggtactcgatacgcttcgaggatgtcacgagcgcagctacgcaggttaaatttgtgact
gatgggctgttattgcgggagatgctcgtcgatccattgttgaagcggtattcagtcatc
atggttgatgaggcacatgagcgcagcctgagtagtgacgtgttgctgagtctgttgaag
aaggttttgaggaaaagagaagatctgagagttgtggtgagtagtgctaccttggaggcc
gagcgatttctggacttcttcaatccggatgaaggcgaaaaggtatggggaaagagcagg
gaagagtatgggaggatcgtaggtatccagggacgaacacatccagttgaggtgcagtac
ttggctgaacccaccaacaactacatcgatcaagccgttgaggccattatggatattcac
gagaacgaagcggacggcgacatcctagtcttcatgactgggagagaagaaattgacgat
tcaatcgacatgattagcgaccgggtcgcagacctgccttctacaaaacagaaactcatg
cccctccctctttacgctggtcttccaacagaagagcaaatgttcgttttccagaaagct
cccaccaacacccgcaaagtaattctcagcaccaacattgctgaagccagcgtaaccatc
gaaggcattgtctatgtcatagacagcggctacgttaaactacgcgcctacgacgctcgt
ctcggaatcgaaaacctcaacgtcgtccctgtctcgcgcgcctctgctacccaaaggtct
ggccgcgcaggccgcacacgtcccggcaaatgctttcgactgtacacagaacaagccttc
aagaaccttgaggaggccaccttccctgagatccaacgttcaaatcttgcacctgtcctt
ttacaacttcttaatctgggcatcacaaacctcatccgcttcgactacctctcaccccca
ccttcggcactcgtaacccgcgctctcgacctcttatactccctcggcgccctcgacaac
aacgcacgcctgacaaaacccttgggggcacgcatggccgaactgcccctggaaccgatg
ctgtcgcgcgcactcctcaacgctgcaagtcccgacttcagctgcctcagcgagatgctc
agcatcgccgcgatgatgaccttacagggcaacgccttcatctcgcacaacgacaacaag
gctcagctcgagaaagcccggcgccgctttgctgtctcggaaggcgaccatctgtcgctg
tacaatgtgttcacagccttcgtccagaacgggcagaacgtgcaatggtgtcgtgagaat
tgtctgaatcataagagtttggtcaaggcggttagcgtgcgtaagcagctagcagcgtat
ctggatcggttcggtgtgaaggagagcgcgctgtctgtgccagatgtactgcgggttggc
ggcagaccgttggcagaacgagtgaggaggtgtcttgcgacgggattctttgcgcatgtg
gcgaaaatgaagagtgatgggagtttctcgacagtggatgggaagacgacgctgtgggcg
catcccagttcggtgttcttccatcgtaaggcggattgggtaatctatacggagattctg
tcgacgagggataaaatttacattcgagatttgtcgaccgtggatatggactggttggcg
gaatatgcgccggagtactacaaggtcaaggatggacgaagatga

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