Ascochyta rabiei: EKO05_0009479
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Entry
EKO05_0009479 CDS
T09445
Name
(RefSeq) U3 snoRNP protein
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
arab
Ascochyta rabiei
Pathway
arab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EKO05_0009479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0009479
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
EKO05_0009479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
Suf
HAT_PRP39_N
UTP6_C
TPR_19
NRDE-2
Motif
Other DBs
NCBI-GeneID:
62217919
NCBI-ProteinID:
XP_038794870
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All DBs
Position
17:join(294930..295019,295075..296325)
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AA seq
446 aa
AA seq
DB search
MAGPSDKARFYLEQGATELNELERKKIFTREEIKSIAKKRSDFEHIINARGAHPTDYMRY
IEFEKNIDALRQKRIKRLGIRHKGAGQRSIYFLYNRATKKFSGDLTLWLHYIDFARKDKA
YRRLSDIFTSVVRLHPTKPELWTLAANYFIDSQADITNARSYMQRGLRFCKNSEHMWLDY
AKLETIYVGKIAGRRKILGLDVDRTKKQQTGGGDDTDTDMIALPDVTAEDINPSLKQDDG
VDELALQNLASAPVLTGAIPLAIFDSAMKQFQNRPKVVQKFFDMFAEFDQLACIPRILQH
VLGYLQQTHPQAVENAICTFRMQLFGQYPGSPEFPVVLGDALDGVSSAIDKYPSEASRLA
EVAVRQLLTIQTSSADIDPALQKAIRSTLRKYVKALGGTDGDKIATLARTLVHEGRRDDA
KALIAPSIKVWATHEELQELRAALET
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccccagtgacaaggcgcgcttctatctggaacagggcgcgacggagctcaac
gagcttgagcgcaagaaaatcttcaccagggaagagatcaagtcgatagccaagaagcgc
tcagacttcgagcacatcatcaacgccagaggcgcgcaccccactgactacatgcgctac
attgaattcgagaagaacatcgacgcgctccgccagaaacgaatcaagcgactcggcata
cggcacaagggcgccggacagcgaagcatctacttcctctacaaccgcgccaccaagaag
ttctcgggcgacctgacgctatggctgcactacatcgactttgcgcgcaaggacaaggcc
tacaggcgcctcagcgacatcttcacctccgtcgtccgcctgcaccccaccaagcccgag
ctctggacccttgccgcaaactacttcatcgactcccaggcggacatcaccaacgcgagg
agctacatgcagcgaggcctgaggttctgcaagaactcggagcacatgtggctggactac
gccaagctggagaccatttacgtgggcaagattgcaggtcgaaggaagatcctgggtctg
gacgtcgaccgcacgaagaagcagcagactggcggcggcgacgacaccgacaccgacatg
attgcgctgcctgacgtcacggcagaagacatcaacccgagtttgaagcaggacgacggc
gtcgacgagctggctctacagaatctggcctcggcgccagtcctgacaggtgcgatccct
ctggccatcttcgactcggccatgaagcaattccagaacaggcccaaggtcgtgcaaaag
ttcttcgacatgtttgccgagttcgatcaattggcatgcatcccgcgcattctgcagcat
gtgctgggttacctgcagcagacccaccctcaggccgtggaaaacgcaatctgcacgttc
cgcatgcagctcttcggccagtaccctggtagcccagagttccccgtcgtactgggcgat
gcgttggatggtgttagttcggccatcgacaaatacccaagtgaagcttcccggctggca
gaggttgctgttcgccagcttctgactatccaaacatcatcagcggacatcgaccccgct
ctgcaaaaggcaatcagatcgactctccgcaaatacgtgaaggcgctaggaggcaccgat
ggtgacaagatcgcaactttggccagaacgctggtgcacgaaggaaggagagacgatgca
aaggcgttgatcgcaccgagcataaaggtctgggctacgcacgaagaattgcaggagctg
agagcagcgttggaaacatga
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