Ascochyta rabiei: EKO05_0009732
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Entry
EKO05_0009732 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K18716
nucleoporin NUP42
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0009732
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EKO05_0009732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Nucleoporin_FG
Torus
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
62218158
NCBI-ProteinID:
XP_038795109
LinkDB
All DBs
Position
17:complement(join(960151..961464,961512..961723,961824..961994,962043..962088))
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AA seq
580 aa
AA seq
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MTVCKFYSQGNCRFGDNCKFEHPGSQRDGNRSSGGGFSARSNNNSNNNNNRFGAFGGGDN
YRPNQNSGGAFGSARDIKTLPYHLDIADIRADLSGQRPIYPLSCYGPGRDAPRQLIEGLV
EISPEELRVRYYTQRATGNENVAQQEESELHAKMQQQVKAIADDIEGAVRYIEEGANVHP
NRLDMVRGNTTPAGQPGSSSSPFAQASGNAFSSAPSTQASAFGQASTPGFGRPAFGQASN
PAQTTSQTSSAFAAPSALGQKPSPFGQPTAIGGGGAFGKPAFGGSGFGQASIPGSGSAFG
QPSGLGQQPAFGQTSAPSSTPAFGQASAPSGTPAFGQASNPAQGSAFGQANALGQTRQSS
GFGKPAFGQSPFGQTAQAGSGTSPFGQQPQTSNPPFGQQPAQGPQSSPFSQAAQSGQQPN
PFGQAQPQQPANQPNPFGGVAAAPSAPAFGQPSAPAFGAPSLGGQQAQASNTQAQNPFGQ
AAGQAAAQSAAAPATAPSPFSTQNQAAPAAVQTPAQPAAAGGPIDPKERYKEGSPEAYEG
EAGKLLEEIYRRVGQMGRFNDDEDIPLTPPKCEWIVPVAI
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgtgtaaattctactctcagggcaactgccgatttggcgacaactgcaagttc
gaacatcctggtagccagcgagatggcaaccggagctctggtggaggcttcagtgcgcgc
tcgaacaacaacagcaacaataacaacaaccgctttggcgccttcggtggcggcgacaac
taccgcccgaatcagaactcgggtggagcatttggttccgctcgtgacatcaagacgctt
ccataccatctagatatcgccgacatcagagcagatctgtccggacagcggcccatctac
cccctctcctgctatggccccggacgtgatgctcctcgccaactgatcgagggcctggta
gaaatcagtccggaagagcttcgcgtacgatattatacgcaacgggctaccggcaacgaa
aatgtcgctcaacaagaagagagcgaactgcacgcaaagatgcaacagcaggtcaaagca
atagcagatgacattgagggcgctgttcgatatatagaagaaggcgccaacgtacatcca
aacaggctggacatggtacgtggcaataccacgcccgccggacaaccaggctctagctca
agtccatttgcacaagcttctggcaatgcattctcctcagcaccatcgacacaagcatca
gcctttggacaggcgtcaacaccaggatttggacgaccggcctttggtcaagcctcgaat
cctgcccagaccacgtcccagaccagctcagcgtttgctgcaccttcagcattgggccag
aagccatctccctttggccaacccacggcgataggaggaggtggcgctttcggcaagccc
gcctttggtggctcaggcttcggccaggcgtctataccaggctcagggagtgcttttggg
caacccagtggcctgggccagcagccggcttttggacagacttcagcgcctagcagcaca
ccagcctttggacaagcttcagcgcccagcggtacgcctgcctttggacaagcctcgaac
ccagcacaaggatcggcgtttgggcaggcgaacgccctggggcagacgcggcagtcaagt
ggattcggtaagcctgcatttggacagagccccttcggacaaacagcgcaagccggttca
ggcacctcgccgttcggccagcagccacagaccagtaaccccccttttggtcagcagcct
gcacaaggccctcagtcatcaccgttcagtcaagccgcacagtctgggcagcagccaaac
ccctttggccaagcgcaaccccagcagcctgcaaaccagcccaatccctttggaggtgtt
gcagcagcaccatcagctccagcatttggtcagccaagcgcccctgctttcggtgccccc
agcctcggggggcagcaagctcaggcttccaacacccaggctcaaaatccattcggccaa
gcagccggccaagcagccgcacaatcagctgcagcgccagcaaccgctccctcacccttc
agcacccagaaccaagcggctccagcagccgtgcagacaccagcacagcccgccgcagca
gggggcccgattgaccctaaggaacggtacaaggaagggagcccagaagcgtacgagggc
gaggcgggtaagctgctggaagagatatatagacgggtgggacagatgggccgcttcaac
gatgacgaggacataccgctcacgccaccaaaatgcgaatggattgtgcctgtcgccatc
tga
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