Ascochyta rabiei: EKO05_0009998
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Entry
EKO05_0009998 CDS
T09445
Name
(RefSeq) histone H4-like TAF Taf6, SAGA complex subunit
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
arab
Ascochyta rabiei
Pathway
arab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EKO05_0009998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0009998
03036 Chromosome and associated proteins [BR:
arab03036
]
EKO05_0009998
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EKO05_0009998
Coactivators
SAGA/TFTC/STAGA complex
EKO05_0009998
Chromosome and associated proteins [BR:
arab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
EKO05_0009998
STAGA complex
EKO05_0009998
TFTC complex
EKO05_0009998
SAGA complex
EKO05_0009998
SLIK complex
EKO05_0009998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
NucS_C
Bromo_TP
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
62218414
NCBI-ProteinID:
XP_059493642
LinkDB
All DBs
Position
18:complement(join(491955..492991,493055..493427))
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AA seq
469 aa
AA seq
DB search
MSSVWNPDNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQ
DVSNALRILNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPRE
VTFTAHWLAVEGVQPSIPQNPTATNQGDLLPKGTNANPHLAAANGLDNVNVKPLVKHVLS
KESQELFAKLSGALIDETNIEWQNAALAAIRTEPGIHQLTTYLLTFIAEKVTHSVKNLFV
LQQMMQATSALLDNQAIYLDPYVAYMVPPVLTCCTGKYLGPKTQAASSNALSETLNGVGP
NGHSSNGPDHFKLRQLAASILSRICQKYGSSNQGLKSRIARTCLRQFMDIGKPLGTHYGA
LLALLIITGNEGMKMLVLPNLKIYNDDVLKGALSDESKKKDAERVLAILLEALKALGGTR
SATMTNGVADMEGLRERLNGKVGDVIADQIIANNFSAAAQAILETDVNI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgtctggaaccccgacaatgtgcgagacgtcgccgaatcagttggcatcgcc
tcactcgccgacaacgtcgtcgaggagctagcgcgcgacgttgacttccggcttgcacag
gtactggaggaggctctgaaattcatgcgacacggcaagcggacgacgctgagcacacag
gacgtgtccaatgctctgagaatattgaatgtggagccgctttacggctacgagtccact
cggccgctgcgctttggcgaggcttccctggggcctggacagccgttgtactatgtcgag
gatgaggaggttgactttgagaaattgatcaatgcgccgcttcccaaggtgccacgagag
gtcacattcacagcgcactggctcgccgtggaaggagtgcaaccatcgataccccagaac
ccaacggcgaccaaccagggagacctgttgcccaagggaaccaatgcaaatcctcatctc
gcggcagccaacggtctggataacgtcaatgtcaagccgctggtgaaacatgtgctctcc
aaagaatcgcaagagcttttcgccaagctctccggtgcactcatcgatgagacgaacatt
gaatggcaaaacgccgcgcttgcggctattcgaacagagcctggcatccaccagctaaca
acgtacctgctcaccttcatcgctgagaaggtcacccacagtgtgaagaacctgttcgtg
ttgcagcagatgatgcaggctactagcgccctgctggacaaccaggctatttatttggat
ccgtatgtcgcatacatggtaccgcctgtcctgacctgttgcacgggtaaatacctagga
ccaaagacacaagcagcgtcctcgaacgccttatcggaaacgctcaacggtgttggcccc
aacggccacagttcgaatggcccagaccatttcaaattacgccagttggctgcctcgatc
cttagccgcatctgccagaagtatgggtcatcgaatcaggggctcaagtcgcggatcgca
aggacgtgcctacggcagttcatggacattggcaagccgctgggcacgcactacggtgca
ctactagcgctgctgatcatcactgggaatgagggcatgaagatgcttgtgttgcctaat
ttgaagatttacaatgacgacgtgctcaagggtgccttatcggacgagagcaagaagaag
gacgcggagcgagtgcttgctatcctgctcgaagccctcaaggcactgggaggcacaaga
tctgcaacaatgaccaacggtgtcgctgatatggaggggctgagggaacgattgaacggc
aaggtcggcgacgttattgccgaccagatcatcgccaacaacttctccgcggctgcgcag
gccatcctggagacagatgtcaacatttga
DBGET
integrated database retrieval system
