Ascochyta rabiei: EKO05_0010147
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Entry
EKO05_0010147 CDS
T09445
Name
(RefSeq) 20S-pre-rRNA D-site endonuclease nob1
KO
K11883
RNA-binding protein NOB1
Organism
arab
Ascochyta rabiei
Pathway
arab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EKO05_0010147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0010147
03051 Proteasome [BR:
arab03051
]
EKO05_0010147
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
EKO05_0010147
Proteasome [BR:
arab03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
EKO05_0010147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
DUF2321
DZR
Zn_ribbon_NUD
Zn_ribbon_15
DZR_2
DUF1272
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
62218558
NCBI-ProteinID:
XP_038794696
LinkDB
All DBs
Position
18:complement(1030147..1031610)
Genome browser
AA seq
487 aa
AA seq
DB search
MAVEPTQKPIHSLILDTGPLIKNVVSISTIINSAEELYTTPAIISEIRDEATRMRVQTTL
MPFLKVRNPSPASYDAVIAFSKKTGDHAVLSRQDLGILALAYEIHCERNSGDWGLRSVPK
GPIKLRPEEEAEAQKQREAKEAAKAAQEQAALENGQADEEDEWSTVTKGSKKSGKKSKGP
NKKNNKPEQAQSQAVSEQPATEAEPPLLSEEAAVQDATQEQPAEVESSLESTQQAPASAP
ATESLEVDLSSLAISSAQEPQQQPTPPASDDEEDDDGEWITDVNLPEHQVKDSGLQADVR
VQGPTQMDVASMTIDFAMQNVLLQMNLKLITTNMQRIKKLSSKVLRCHACFQIVKDMSKQ
FCPRCGGATLARVSCSTNAKGEFHIHLAKNYTYNKRGDKYSIPKPIAGTANTKWSGLGGG
KGGWGRDLILAEDQKEYTKQLVQDKRERAKDLMDQDYLPGILTGDRGRTGGRPKVGAGKN
TNSKKRH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgaaccaacccaaaagcccatccactcgcttattctggacactggcccactg
atcaagaacgttgtctccatctcaaccatcatcaactctgccgaggaactctacactacg
ccagctatcatctcagaaattcgagatgaagcgaccagaatgcgagtgcagactaccttg
atgccatttctgaaagtgcgcaaccccagccccgcaagctacgacgcagtcattgctttc
agtaaaaagactggcgaccatgctgtgctgagtaggcaggatttgggtatcttggcgctg
gcgtacgagattcactgcgagagaaacagcggagattggggcttgaggtcagtgcccaag
gggccgatcaagctgagaccagaggaggaagccgaagcgcagaaacagagagaggcgaag
gaagcagcgaaggcagctcaagagcaagcagcgttggagaacggtcaagcggacgaggag
gatgagtggtcgaccgtcaccaagggatctaagaagtcgggaaagaagtcaaagggtccg
aataagaagaacaacaagccagagcaagcacagagccaggcggtttccgagcagccagca
actgaggccgagcctcctctactctccgaggaggctgcagtacaggatgctacacaagag
cagccagctgaggttgaaagtagcttggagtctacgcagcaagcacccgcttccgcaccg
gctacagagtcgctcgaggtagacctctcatcgctcgccatctcgtcagctcaagagccg
cagcagcaacctacgcctcctgcatctgatgacgaggaggacgatgatggtgaatggatc
acagacgtcaaccttcctgaacaccaagtcaaagactctggcctacaggctgatgtacgc
gttcaaggccctactcagatggacgtagcaagcatgacgattgattttgcgatgcaaaac
gtgctcctccagatgaacctgaagctcatcacgaccaacatgcaacgcatcaagaagctg
tcttccaaggtgctacgctgccacgcctgcttccagattgtcaaggacatgagcaagcag
ttctgcccgcgctgcggtggcgctaccctcgcacgagtgtcgtgcagcacaaatgcaaag
ggcgagttccacatccaccttgcgaagaactacacgtacaacaagcgcggtgacaagtac
agcatccccaagccgattgcaggcaccgcgaataccaagtggagcggtctcggtggtgga
aagggaggatggggaagagatctgattctcgcggaggatcagaaagagtacacgaagcaa
ctggtccaggataaaagggagagggccaaggatctcatggaccaggattacctgccgggc
attctcacgggggaccgcggaaggacaggaggcaggccaaaggttggcgctgggaagaac
accaactctaagaagaggcattaa
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