Ascochyta rabiei: EKO05_0010441
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Entry
EKO05_0010441 CDS
T09445
Name
(RefSeq) RNA helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0010441
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0010441
Enzymes [BR:
arab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EKO05_0010441
Spliceosome [BR:
arab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EKO05_0010441
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
90S particles
Helicases
EKO05_0010441
Pre-60S particles
EKO05_0010441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Cwf_Cwc_15
Latrophilin
Motif
Other DBs
NCBI-GeneID:
62218741
NCBI-ProteinID:
XP_038794234
LinkDB
All DBs
Position
19:join(926141..926655,926705..927738,927819..928117)
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AA seq
615 aa
AA seq
DB search
MGAQEIEAKKRKRKHSSKKTEEVAAPKRHSNGVEKADKPRKKAKKEHTPEPEVEEAVAEA
SEEEEEEEEEEEEDVEVEVEGEEDEAKLNAELKQIAKKAKKSKKADAEASDDEQEQSANP
NDLPLGTSMPNVEDPKLFSELKLSDRTMEAIKSMGFETMTEIQQKTIPPLLSGKDVLGAA
KTGSGKTLAFLIPAIEMLSAMRFKPRNGTGVIVVSPTRELALQIFGVARELMEKHSQTFG
IVIGGANRRAEAEKLVKGVNLLIATPGRLLDHLHNTPGFVFKNLKSLIIDEADRILEVGF
EDEMRSIIKILPTDRQTMLFSATQTTKVEDLARISLKAGPLYINVDYRKEHSTVEGLEQG
YVICDSDTRFRLLFSFLKKHQKKKVIVFFSSCNSVKFYAELLNYIDLPVLELHGKLKQQA
RTNRFFEFCNATSGTLICTDVAARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTARGSQGK
GRSLMFLLPSEIGFLKLLKEARVPLVEFELPANKILNIQSQLEALITKNYYLNKSAKDGY
RSYLQAYASHSLRSVFDVHKLDLVKVAKSFGFSTPPRIDISLGASLSRDKKVEGRRAYGS
QPQQGRRPMKPGKRF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggagcccaggaaatcgaagccaagaagcgcaagcgcaagcacagcagcaagaagacg
gaggaggttgccgcgccgaagagacacagcaatggcgtagagaaggccgacaagcctcgc
aagaaggcgaagaaggagcacacgcctgagccggaggtcgaggaggctgtcgcagaggct
tctgaggaagaggaggaggaggaagaagaagaagaggaagatgtggaagtggaagtggag
ggtgaggaggacgaggccaagctcaacgccgagctgaagcagattgcaaagaaggcgaag
aagagcaagaaggcagatgcagaggcgtcggacgatgagcaggagcagagcgcaaatccg
aacgacctgccgctgggcacttcgatgccaaatgtcgaggacccaaagctcttttctgag
ctgaagctctcggaccgcacaatggaggccatcaagtcgatgggcttcgagaccatgacc
gagatccagcagaagacgatcccgccgctgctgagtggcaaggacgtgctcggagctgcg
aagacgggtagcggaaagacgctcgccttcctgattcccgcgatcgaaatgctgtctgcg
atgcgattcaagccgcgcaacggtaccggcgtcatcgtggtctcgcccacgcgcgaactc
gcgcttcagatcttcggtgttgcacgcgagctcatggagaagcactctcagacattcggc
atcgtcattggaggcgccaacaggagagcagaggcagagaagctggtcaagggcgtgaac
ctgctgattgcgacgcccggacgcttgttggatcacttgcacaacactccaggctttgtg
ttcaagaacctgaagagcttgatcatcgacgaagccgatcgcattctggaagtaggattc
gaggacgaaatgcgcagcatcatcaagatcctgcccacggaccgacagacgatgctcttc
tccgcgacgcagacaacaaaggtcgaggacctcgcgcgcatctcgctgaaggccgggccg
ctgtacatcaacgtcgactaccgcaaggagcactcgacggtggaggggttggagcaaggc
tacgtaatctgcgactcggacacgcgcttcaggctgctcttcagcttcctcaagaagcac
cagaagaagaaggtgattgtcttcttctcgtcgtgcaacagcgtcaagttctacgccgag
ctgctcaactacatcgacctccccgtcctggagctgcacggcaagctcaaacagcaggcg
cgcaccaaccgcttcttcgagttctgcaacgccacatccggcacgctcatctgtaccgat
gtcgcagcgcgtggtctcgacatccccgaggtggactgggtgattcagttcgaccccccg
gatgacccgcgcgactacatccaccgcgttggacgaacagcgcgtggatcgcagggcaag
ggcaggagtctgatgtttctgctgccgagcgagattgggttccttaagctgctgaaagag
gcgcgggttccgctcgttgaattcgagctccccgccaacaagattctcaacatacaatcc
caactcgaagcgctcatcaccaagaactactacctcaacaaatcggccaaggacggatac
cgctcgtacctgcaagcgtacgcatcgcacagcctgcgcagcgtcttcgacgtgcacaaa
ctcgacctggtcaaggtggccaagagcttcgggttcagcacgccgccgcgcatcgacatc
agtctgggcgccagcttgagccgcgacaagaaggtcgagggcaggcgggcgtacgggagc
cagccgcagcagggcaggcggccgatgaagcccgggaagcggttctga
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