Ascochyta rabiei: EKO05_0010562
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Entry
EKO05_0010562 CDS
T09445
Name
(RefSeq) niemann-Pick type C-protein 1
KO
K12385
Niemann-Pick C1 protein
Organism
arab
Ascochyta rabiei
Pathway
arab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
EKO05_0010562
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
EKO05_0010562
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arab02000
]
EKO05_0010562
Transporters [BR:
arab02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
EKO05_0010562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
MMPL
Folate_rec
Motif
Other DBs
NCBI-GeneID:
62219343
NCBI-ProteinID:
XP_038793522
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All DBs
Position
20:complement(join(265998..266210,266265..269879))
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AA seq
1275 aa
AA seq
DB search
MAQRRSAGWRAATVGLFSLLASAALAGPDLTTRHEKGRCAIRGQCGKQSFFGSELPCPDN
GPAKTPTDDVRKQLVAICGEQWSETDVCCEAEQLDALKTNLDRATPIINACPACKENFFN
MFCTFTCSPDQSLFINVTDTAPKGDKFLVTELTHLVSDEYAGTFYDSCKDVKFGATNGKA
MDFIGGGAKNYTQFLKFLGDKKFLGSPFQINFPRPDEAEFPDMEAMNKHAYPCDTDDEQY
RCACLDCGSSCTQLPEVTEAKQCYVGLLPCLSFAVIIVYSALLALLCTGVAAHVAKQKIS
QQKNERLRLLQDLEPSDDEDEGDIVHNIGMLDRPTKHYMVNTWCDRLFSRLGYVCARFPV
ITIVTSVVVVALMSLGWLRFTIETDPVRLWVAPDSAAAQEKAFFDEKFGPFFRAEQAFLV
NDTSKGAPVLSYETLDWWFGVEDQIRRLKSSQSGATLDQVCFKPIEDACVVQSVTGYFQG
DFANLSPSSWQDDIMDCVDNPTQCLPEFQQPLDPHLLFGGVNQSVLDAQALVVTWVVKNH
AEGTPELQRAMDFEDEMKNYLKLVQDDAKSRGLRLSFSTEVSLEQELNKSTNTDAKIVVV
SYIVMFLYASLALGSTTLTVRSVLRNPANALVQSKFMLGTVGILIVLMSVAASVGLFSAA
GIKVTLIIAEVIPFLVLAVGVDNIFLIVHEFERINVSHPEGSIPERVSRALGRMGPSILL
SALTETTAFALGCAVGMPAVRNFAAYAAGAVFINAILQVTMFIAVLSLNQQRVENNRADC
FPFLRVLKADPGYLNGGMGHGAGEEGALQRFIRKTYAPAILGKKTKVAILAVFFGIFTAG
IALFPAVELGLDQRIAMPSDSYLIPYFNDLYDYLDVGPPVYFITRELNVTERKPQKELCG
RFSTCDQISLANIVEAERKRPEVSYLAAPAASWLDDFFLWLNPENEKCCVDKGKPCFANR
TPAWNMTLYGMPEGEEFIHYLERWIDAPTTEDCPLGGKAAYSDALVIDAKHNTIPASHFR
TSHTPLRSQSDFIAAYTAARRIAKEISKDVETEVFPYSKFYIFFDQYTSIVRLAGALIGS
ALAAVLVITTILLGSISTALVVTLVVAMIVSAIIGSMAVMGVSLNAVSLVNLIICVGISV
EFTAHIARAFTFPSRATMERAPRHRFRGRDARAWTAMVNVASSVISGITITKILGVGVLA
FTRSKIFEIYYFRVWVALVLWASTHALILLPVLLSMFGGRGYVDPESEGGLEQDLRRRQY
PALLGDDDEEYDSDD
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacggcgctcagcaggatggagggcggcaacagtggggctgttctccctcctc
gccagtgcagcgctcgcaggaccggacctgacgacaaggcacgagaagggacgctgcgcc
ataaggggccagtgtggcaagcagagcttctttggatctgagctgccctgtcccgacaat
ggcccagccaagacaccgaccgacgacgtcaggaagcaactggtcgccatttgcggtgag
caatggtcagagacagacgtctgttgtgaggccgagcagctggatgccctcaagacgaac
ctcgaccgcgccacgcccatcatcaacgcctgcccggcctgcaaggagaatttcttcaac
atgttctgcacattcacctgctcgccagaccagtcgctgttcatcaacgtgacagacacg
gcgccaaagggcgacaagtttctcgtcacggagttgacccacctggtttcggacgagtac
gcaggcacattctacgacagctgcaaggatgtcaagttcggcgccaccaacggcaaggcc
atggacttcattggcggcggcgcgaagaactacacgcagttcctgaagttccttggcgat
aagaagttcctcggctctcccttccagatcaacttcccgcgtccagatgaggccgagttt
cccgacatggaggccatgaacaagcacgcatacccgtgcgataccgacgatgagcagtac
aggtgcgcttgtcttgattgcggcagttcgtgcactcagctccctgaggtcaccgaggct
aagcagtgttacgtcggcttgctgccttgcctttcttttgctgtcatcatcgtttactct
gcgctactggccttgctgtgtactggtgtcgccgcacacgtcgccaaacagaagatctcg
caacagaagaacgaacgactgcgccttctacaagatctggagcccagtgatgatgaggat
gaaggcgacatcgtccacaacatcggcatgttggaccgtcccaccaagcactacatggtc
aacacatggtgcgaccgtctcttcagccgccttggttatgtatgcgcgaggtttccggtg
atcaccatcgtcaccagtgttgttgtcgtcgcgttgatgagcttagggtggctgcgtttt
accatcgagactgatcctgttcgcctatgggttgctccagattcggcagctgcacaagag
aaggcattcttcgacgagaagtttggtcctttcttccgagccgagcaagctttcctcgtc
aacgataccagcaagggtgcgccagtgctgagctacgagacgctggactggtggttcggc
gttgaggaccagattcgccgtctcaagtcatctcaaagcggagcaactctcgaccaggtc
tgcttcaagccgatcgaagacgcttgcgttgtgcaatcggtgactggctacttccaaggc
gatttcgcgaacctgtcgcctagtagttggcaggatgacatcatggactgcgttgacaat
cctactcagtgcttgcctgagtttcagcagcctctggaccctcatctcctattcggtggt
gtcaaccagagcgtcctggatgcccaggcgctcgttgttacatgggtagtaaagaaccac
gccgaaggtacgcctgagctgcaacgcgcgatggactttgaggatgagatgaagaactat
cttaagctggtacaagacgatgccaagagtcgtggtcttcgcctgagtttcagcaccgaa
gtcagtctcgagcaggagctcaataagagcaccaacaccgatgctaagatcgtggtggtg
agctacatcgtcatgttcttgtatgcctcactcgcactcggctcgacaacccttacagta
cgatctgtcctccgcaaccctgcaaatgcgcttgttcagtccaagtttatgctgggaact
gttggcattctcattgtccttatgtcggtcgcagcctccgttggactgttctctgccgct
ggtatcaaggtcaccctgatcatcgctgaagtcatccccttcctggtactggctgttggc
gtcgacaacatcttcctcatcgtgcacgagttcgaacgcatcaacgttagccaccccgaa
ggctccatcccggagcgcgtatcgcgtgctctgggtcgcatgggaccgtccattctgctt
tctgcacttacagaaacgactgcgtttgctctcggctgcgcagtgggcatgcctgcggta
cgcaacttcgctgcgtatgccgcaggtgctgttttcatcaacgccatccttcaggttacg
atgttcatcgctgttctttctctgaaccagcagcgcgtcgagaacaaccgcgccgactgc
ttcccattccttcgagtactgaaggcggaccccggctacctcaacggcggcatgggtcac
ggcgctggcgaagagggagctttgcagcgcttcattcgtaagacttacgccccagctatt
ctaggtaagaagaccaaggtagccatcctcgccgtcttcttcggtatattcacagctggc
attgctttgttccctgccgtcgagcttggcctcgatcagcgcatcgccatgccaagcgac
tcttacctcattccgtacttcaacgatttgtacgactacctcgacgtcggcccgccagtc
tatttcatcaccagagagctcaatgtcaccgagaggaagccccagaaggaactctgcggt
cgcttttccacttgtgaccaaatcagtctcgcgaatattgttgaagccgaacgtaagcga
cccgaggtgtcgtacctggctgcacctgctgccagctggctggacgacttcttcctttgg
ttgaaccccgagaatgagaagtgttgtgtcgacaagggcaagccctgcttcgccaaccgc
actccagcgtggaacatgaccctctacggcatgcccgagggcgaagagttcattcactac
ctcgaacgctggattgatgcgccaaccacagaagactgtcctctgggtggcaaggctgcc
tattctgacgcccttgtcatcgacgccaaacacaacacgatcccagcttcgcacttccgt
acttcccacactcctctccgttcgcagagcgactttattgctgcatacactgcagcacgc
cgcatcgccaaggaaatctccaaggatgtcgagaccgaagtcttcccctactccaaattt
tacatatttttcgaccaatacacatccatcgttcgcctcgccggcgccctcatcggctca
gcgcttgcagccgtactggtcatcactacaatcctgcttggctccatctccacagccctt
gttgttactcttgttgttgccatgattgtatcagccattatcggctccatggccgttatg
ggtgtgtcgctcaacgccgtgtccctcgtcaacctgatcatttgcgtcggtatcagcgtt
gagttcacagctcacatcgcacgcgcattcacatttcccagccgcgcgacaatggagcga
gcgccccgtcaccgcttccgtggtcgcgatgctcgtgcctggaccgccatggtcaacgtt
gcaagcagcgtcatcagcggaattacaatcacgaagatcctcggtgtcggcgtactggcc
ttcactcgtagcaagatttttgaaatctactacttccgcgtctgggtcgcgctcgttctg
tgggcctcgacacacgcacttattctcctccctgtcttgctcagcatgttcggagggaga
ggctacgtcgatcccgagagcgaaggcgggctcgagcaggatctgaggcggagacagtat
cccgcgctgctaggtgacgacgatgaggagtacgacagcgatgattag
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