Ascochyta rabiei: EKO05_0010816
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Entry
EKO05_0010816 CDS
T09445
Name
(RefSeq) Vacuolar protein-sorting-associated protein 27
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
arab
Ascochyta rabiei
Pathway
arab03250
Viral life cycle - HIV-1
arab04144
Endocytosis
arab04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EKO05_0010816
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
EKO05_0010816
04145 Phagosome
EKO05_0010816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0010816
Membrane trafficking [BR:
arab04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
EKO05_0010816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
FYVE
Vps27_GAT-like
GAT
UIM
FYVE_2
FYVE_CARP1-2
UIM_2
ENTH
KNTase_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
62219577
NCBI-ProteinID:
XP_038793756
LinkDB
All DBs
Position
20:join(1154616..1154689,1154745..1154877,1154928..1155212,1155262..1156024,1156071..1157146)
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AA seq
776 aa
AA seq
DB search
MAGWFGSSTNSALDEQIERATTSSLEDMPLNLEISDVIRSKTVQPKDAMRSLKKRIGNKN
PNVQLATLNLTDTCVKNGGAHFIQEIASREFLDNMTSLIKAPAGVAANHEVRSKMLELIQ
SWATAAEGRSNLGYINDVYRTLQREGYHFPPKENISSSMLDSSAPPEWIDSDVCMRCRTP
FTFTNRKHHCRNCGNVFCGACSSNNIPLPHLGIMDPVRVDDGCHAKLTDRSRGTPAPPRF
DAPKPNKTLYQGAMEPRNPRVEDSFDADLKRALEMSLEDARGNSSSGFVSQAQLHSTPKP
NGTAKKPEPEEDEDADLKAAIAASLADMEEQKNKYATNFRQQAASDSNGTPFVAPKNDYE
LTPVEAENINLFSTLVDRLQHQTPGAILREPQIQELYESIGKLRPKLARTYGETMSKHET
LLDLHAKLSTVVRYYDRMLEERLSSTYTQAGAMYGMPRPAPHVYPQISSGAPAYQGSEKY
YSSSAAPSDPYGRPQPSYQSQPQQPYPPFDQRASALPQSYAPPHDQYQQAQQPSQPYPNL
ASYSAGAATQQPPSASYQPPSPQLQRQASTQYPPAYPPQAPSNVSDTESANYYYGDNSAP
TPIQRTQSYTSQPAQSSSPQMYNRAPPQQQTPISPPEQPATAWQNPPYPRDNAPQQQQAP
QQQQWQQPQHQPPSQQPPQHQQPQQQPQPQQQPQPQQQPQPQQHPQPQQHPQPQQHPQPQ
QHPQPQQHPQPQQQPQQSHWNPATPYAMGGYGPESFPAAPQAAPVQQKVDEPLIDL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctggttcgggtcctcgaccaacagcgcgctcgatgagcagatcgagcgcgcc
accacctcgagcttagaggacatgcccctcaacctcgagatctccgacgtgattcgatcc
aagacagtgcagcctaaagacgccatgcgctcgctgaagaagcgcatagggaacaagaac
cccaacgtccagctggccactctgaacctcacggacacgtgcgtcaagaacggcggcgcc
cacttcatacaggagatagcttcgcgcgagttcctcgacaacatgacgtccctcatcaag
gcgccagccggcgttgccgcgaaccacgaggtaaggagcaagatgctggagctcatccag
tcgtgggcgacggcagcggaggggcggagcaatctaggctacatcaacgacgtctaccgg
accttgcaacgagagggctaccacttcccacccaaggagaacatctcgagcagcatgctt
gacagcagtgcacccccagagtggatagactcggacgtatgcatgcgctgccgtaccccc
ttcaccttcacgaaccgcaagcaccactgcaggaactgcggtaacgtcttctgcggcgcg
tgctcgagcaacaacatccccctgccacaccttggcatcatggacccggtacgagtcgac
gatggctgccatgcgaagctcaccgatcgatcgcgaggaacgccagcaccgccgagattc
gacgcgccaaagccgaacaagacactgtaccaaggcgcgatggagccgcgcaatccgcgc
gtcgaggacagcttcgacgcagacctgaagcgagccttggagatgagcctggaagacgca
aggggcaacagctcctccggcttcgtgtcacaggcgcagctgcactcaacccccaagccc
aacggcacagcgaagaagcctgaaccggaagaggacgaggacgccgatttgaaagctgct
attgcagcctcgctggccgacatggaagagcagaagaacaagtacgccacaaacttccgc
caacaggcggccagcgactcaaatgggacaccctttgtcgcgcccaagaacgactacgag
ctcacccctgtggaggcggagaacatcaacctcttctcgacactagtagaccgactgcaa
caccagactcccggcgctatcctgcgcgagcctcaaattcaagagctgtacgagagcata
ggcaagctgcggccgaagctcgctcgcacgtacggcgagacgatgagcaagcatgaaaca
cttctcgatcttcatgccaagctttccaccgtcgtccgctactacgaccgcatgctcgag
gagcgtctgtccagcacatatacccaggccggtgctatgtacggaatgcctcgtcctgcg
ccccacgtttaccctcaaatctcctccggcgcacccgcataccagggcagcgaaaaatac
tactcgagcagcgcagccccttcagacccatacggacgaccgcagcccagctatcagtcg
caaccgcagcagccgtaccctccgttcgaccagcgcgcgtctgcactgccgcagtcgtac
gcgccacctcacgaccaataccagcaagcccagcaaccctcgcagccctacccgaatctg
gcctcgtatagtgcaggagcagcaacccaacaaccacccagtgcgtcttaccagccgcca
tcgccacaactccaacgccaagcctcgacccaatatccgcccgcctacccaccgcaagcg
ccctccaacgtctccgataccgaaagcgcgaactactactatggtgacaacagcgcacct
acaccgattcagcgcacgcaaagctatacctcgcagccagcgcaatcctcgtcaccacaa
atgtacaaccgcgcaccaccccagcaacaaacgccgatctcacctccagagcaaccagca
acagcatggcagaatcctccctacccacgggacaatgcgccacagcaacagcaggctcct
cagcagcagcaatggcagcagccgcagcatcaaccaccttcacagcaacccccacagcat
cagcagccgcaacaacaaccgcagccgcaacaacaaccgcagccgcaacaacaaccgcag
ccgcaacaacatccacagccgcaacaacatccgcagccgcaacaacatccgcagccccaa
caacatccgcagccccaacaacatccacagccccaacaacaaccgcagcagagtcactgg
aacccggcaaccccctacgcgatgggcggctacggaccggagagtttccctgccgcgcca
caagcagcgcccgtgcagcagaaggtcgacgagccgctgattgatctgtag
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