Ascochyta rabiei: EKO05_0011037
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Entry
EKO05_0011037 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K14299
nucleoporin SEH1
Organism
arab
Ascochyta rabiei
Pathway
arab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EKO05_0011037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0011037
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0011037
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EKO05_0011037
Membrane trafficking [BR:
arab04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
EKO05_0011037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
62219800
NCBI-ProteinID:
XP_038793293
LinkDB
All DBs
Position
21:join(636464..637018,637099..637957,638006..638115)
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AA seq
507 aa
AA seq
DB search
MDFNAPAKHTRSDTVQLLDAVTRRLARPAFLSSITPSRLPSQAASDASLSPTRDEARFHS
GPLTSHRHYLAGTVRDALEQADLVAPLIQEPCADGSSPSVDKRILQNLEQGFVGARHAYA
KMASERNFTTFSHGHQDLVLAVDFNYFGTRMVTASSDHRLKVWDKKDESWSLVESWKAHD
AEITDAKWNGPFMGEVVGSIGEDGRCKLWQEDATEVPLSGNRFKLIANLVSTGHAPFMSL
DFKNIMQETWLALITRDGRLTVYEPSDQSSLNEWTILAERSVSEENPPDRQDEVGFKVVF
HKEKLPCWTAIMAGLDRKSLSLAVAAMKEILIFRTDKAKRFFQVAKLEGARQIIRDLAWA
NGSMRGHDILATASKDGVIRIYELSTPSSGKSATAGSSTTAAIFTPAESPRTDPRKNAPS
GIGAGLAGASKVSEIPRESEQYPGRISQLAKLTDELTDHHGAVWRVAFSQMGDLLVSTGD
DASIRTWKKAVNGRWAEYAEIETAREN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaacgccccagcaaagcatacacgatccgataccgttcagctcctggacgct
gtgacacgtcgccttgcgcgtccggctttcctctccagcatcacgccgtcgcggctgcca
tcgcaggctgcaagcgatgcgtctttgagccccactcgcgacgaagcacggttccactct
ggtccgctaaccagccatcgtcactacctcgcagggacagtcagagatgcccttgaacaa
gccgacctcgtagccccgctgattcaggagccttgtgccgacggcagctcaccaagcgtt
gacaagcgcatccttcagaatctggaacagggcttcgttggagcgcgtcacgcgtacgca
aagatggcctcagagcgcaactttaccaccttctctcacggccaccaggaccttgtgctt
gctgttgacttcaattacttcggaacacgtatggtgactgcgagctcggatcatcgcctg
aaagtatgggataagaaagatgaatcttggtctcttgtggagagttggaaagcgcacgat
gctgagattaccgatgccaagtggaacggtccgttcatgggcgaggttgtaggaagcatc
ggcgaagatggccgctgcaagctttggcaagaggatgctactgaagtgcctctgtctggc
aaccgttttaaactcattgcaaacctggtgtctaccggtcatgctccatttatgtctctt
gacttcaagaatataatgcaagagacttggctagcgctgatcactcgtgatggtcgtttg
actgtctacgagccgtccgatcagagcagcttgaacgagtggaccattctggcagagcgc
tctgtctccgaagaaaaccctccagatcgccaagacgaggttggcttcaaggtagtgttt
cacaaggaaaaattgccatgctggaccgcgatcatggccggcttagatcgcaagtcgctg
tcgcttgccgtggcagcgatgaaggaaatccttatcttcaggaccgacaaagccaagcgt
ttttttcaggtggcgaagctggagggcgctcgacaaatcattcgtgacctggcgtgggcc
aatggatccatgcggggtcatgatatacttgcaacagcaagcaaggatggtgtcatccgt
atctatgaactatcaacacctagttcggggaaaagtgcgactgctgggtcatcgacaact
gctgcgattttcacgcctgccgagtcacctcgcacagacccacgcaagaacgccccttct
ggcataggagccgggttagctggtgcatccaaggtttctgagataccacgcgagagcgag
caatatccaggacggatatcacagctggcaaagcttacagacgagcttacagaccatcat
ggagcggtttggcgagtggcattttcgcaaatgggtgatttgcttgtctctaccggtgac
gacgcttcgattcgcacatggaagaaagctgtgaacgggcgttgggcagagtatgcagaa
atcgagaccgcgcgcgaaaattga
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