Ascochyta rabiei: EKO05_0011208
Help
Entry
EKO05_0011208 CDS
T09445
Name
(RefSeq) Endo-polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
arab
Ascochyta rabiei
Pathway
arab00040
Pentose and glucuronate interconversions
arab01100
Metabolic pathways
Module
arab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EKO05_0011208
Enzymes [BR:
arab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
EKO05_0011208
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
62219964
NCBI-ProteinID:
XP_038793457
LinkDB
All DBs
Position
21:complement(join(1124591..1125368,1125424..1125802,1125858..1125870))
Genome browser
AA seq
389 aa
AA seq
DB search
MQTIGLSVLLALATVGQSTYIKERPAKPTATAAPCHVTAYSAIPAAIAACTAITLDGITV
PGNSTIDLSKLKKGTKVTFKGTTFWEYFDANYPFIKVGGTNIEITAANGAVLDGNGQSWW
DGLGSNGGIAKPNHFIELNKVLGSSSVHDIYIQNYPVHCFAISNSAGLDVYHITLNNSAG
YAPNARSNGLPASHNSDGFDISSTNDTKVRDSVVINQDDCVAITSGNNIIVDNMHCNGSH
GLSIGSVGGKSNNNVTNIVFRNSVVLNAENGARIKTNENTTGWINNIVFENIRVENISIY
GIDIQQDYLNGGPTGHPTAGVIISDITIKNVTGTATKKGRNYYILCGPGSCKNIFIKDVD
IQGGGVPSLCNYQTGGNFNCDGHLSMTSS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaattggtctttcagtgctgctggcactcgccactgttgggcagtccacctac
ataaaggagcgtcccgccaagcctacagctactgccgccccatgccacgtgaccgcttac
tcagctatcccggctgctatcgcggcttgcactgccatcactctcgacggcatcaccgtt
cctggaaactcaaccatcgatctctcgaagctaaagaaaggtaccaaagtcaccttcaag
ggtactacattttgggaatactttgatgccaactacccgttcatcaaggttggaggcaca
aatattgagatcactgccgctaatggcgctgtccttgatggcaatggtcaatcatggtgg
gatggtctgggtagcaatggtggcattgccaaacccaaccatttcatcgaactcaacaag
gttcttggatctagttcagtgcacgacatctacattcaaaactacccggtgcactgcttt
gccatcagcaacagcgctggccttgacgtctaccacattactctcaacaatagtgctgga
tatgctcccaacgctcgttctaacggcctgccagcctcgcacaacagtgatggtttcgat
atatcctcaaccaacgacacgaaggtccgcgacagtgtagttatcaaccaagacgactgt
gtagccatcaccagtggtaacaatatcatcgtcgacaacatgcactgcaacggcagccac
ggactatccatcggctcggtgggcggcaagtccaacaacaatgtcaccaacattgtcttc
agaaactccgttgttctcaatgctgagaatggtgcccgcatcaagaccaatgagaacacc
actggctggattaacaacatcgtgttcgagaacattcgcgttgagaacatctccatctac
ggcatcgacatccagcaagactacctcaacggaggtcccacgggtcacccgactgctggg
gttattatctccgacatcaccatcaagaacgttacaggtaccgcgacaaagaagggcagg
aactactacatcctctgcggtccgggcagctgcaagaacattttcatcaaggatgtcgac
attcaaggtggaggcgtgcccagtttgtgtaactatcagacaggaggcaactttaattgc
gatggacatctcagcatgacgagctcctag
DBGET
integrated database retrieval system
