Ascochyta rabiei: EKO05_0011443
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Entry
EKO05_0011443 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arab03016
]
EKO05_0011443
Enzymes [BR:
arab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EKO05_0011443
Transfer RNA biogenesis [BR:
arab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EKO05_0011443
Prokaryotic type
EKO05_0011443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
62220576
NCBI-ProteinID:
XP_038792627
LinkDB
All DBs
Position
22:complement(join(680820..680979,681131..682672,682719..682861))
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AA seq
614 aa
AA seq
DB search
MADSGSSNRDGKRKWDGGGDRRRGRGGGSMQHGSRPNKKRNMGRKEHANEQLDRRGRNAE
QQARNKEAQDKGENDKPALPSAFPAEEVAAEERRPKRKVAVMVGYSGTGYKGMQIDNKQK
TIEGDLFKAFVAAGAISKANADDPKKSALVRCARTDKGVHAAGNVISLKLIIEDDDIVEK
INANLSEQIRVWGIQRTVGSFSCYQACDSRWYEYLIPTHSFLPPHPSSYLGKKLVEEAEK
AGDVEGYKKRQAEVADFWSEVEEKSIKPILATLDDSIKPLVEEALYIADSTDAPEDTDPV
IEASIDEALKDAKDAEAAKASSEEAAAETAKSDADEAMQVDDAKEAVEKIEAQHPTTTFD
DQTDGSIPLPSGIVNKPALEEAVKALKKAIMDAKRSYRISPERQERVQEALNNYLGTRRY
HNYTVQKKFTDSSAKRYIKSFKVAPKPIIINNTEWLSLKVHGQSFMMHQIRKMVGMAALT
VRCGTNPNIMLESFENNVVRIPKAPGLGLLLERPVFDSYNDKMAKAHGREKIDFANYDDK
IQEFKEREIYQRIFREEAQGNQFNTFFTHLDNYKDTTFLYLTSGGIQATKEGRKNKSTQP
KFEQDSDNEYASDN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagcggctcgtcaaatcgcgacggcaagcgcaaatgggacggcggcggcgac
cgcaggcgaggccgcggaggtggcagcatgcagcacggcagccgtccgaataagaagaga
aatatgggccgtaaggagcacgccaacgagcaattagataggcgaggccgcaatgcagag
cagcaggcgcgcaataaggaagcgcaagacaagggcgagaacgacaagccagcgctccct
tcagctttccctgctgaagaggtcgcggccgaggagcgcaggccgaagcgcaaagtagcc
gtcatggttggctattcgggcactggctacaagggcatgcaaatcgacaacaagcaaaag
accattgagggcgatctcttcaaggcgtttgtcgctgccggcgcgatatcgaaagcgaac
gccgacgacccaaagaagtccgcacttgtgcgctgcgcacgtaccgacaagggtgtccac
gctgccggcaacgtcatttccttgaagctgatcatcgaggacgatgatattgtggagaag
atcaacgccaacctctccgaacagattcgagtatggggcattcagcggaccgtagggtcg
ttcagctgctaccaagcctgcgactcacgatggtacgagtacctcatcccgacacattca
ttcctcccgccgcacccatcgagctacctaggcaagaagctggtcgaggaagcagagaag
gcgggcgacgttgaagggtacaagaagaggcaggctgaggtggcagacttctggtcggag
gtcgaggagaagtccatcaaacctatcctggccacactggatgattcgataaagccgctc
gtagaagaggctctgtacattgctgattctaccgacgcgcccgaggacacggaccctgtc
atcgaggcttcaatcgacgaggcgctgaaagatgccaaggacgctgaagccgcgaaagcc
tcaagcgaagaagctgctgccgaaactgcaaagtcagacgccgacgaagccatgcaagtc
gacgatgccaaggaggcggttgaaaagattgaggctcagcatcccaccacaacttttgat
gaccagaccgacggttctatcccgctcccctccggcatcgtgaataagcccgctcttgaa
gaagcagtcaaagcattaaagaaagccatcatggacgccaaacgttcgtaccgtatcagt
ccggagcgccaggagcgcgtccaagaagcgctgaacaactacctcggaacccgacgctat
cacaactacacggtacagaagaaattcaccgactcgtcggcaaagcggtacatcaagtcg
ttcaaggtggccccgaagcccatcatcatcaacaacaccgaatggctgagcttgaaggtg
cacgggcagagtttcatgatgcaccagatccgcaagatggtgggcatggccgccctgacc
gtccgctgcggcacaaatcccaacatcatgcttgagagcttcgagaacaacgtggtgcgc
ataccgaaagcgcctgggcttggtctgctgctcgagcggcctgtgttcgacagctacaac
gacaagatggccaaggcgcacgggcgcgagaagattgatttcgcaaactacgacgacaag
attcaggaattcaaggagcgcgagatttatcagcgtatcttccgcgaggaggcccagggg
aaccagttcaataccttcttcacgcacctcgacaactacaaggacacgacgttcctgtat
ctgacgtcgggcgggattcaagcgaccaaggagggccgcaagaacaagtcgacacagccc
aagttcgagcaggactcggataatgagtacgcaagtgacaactaa
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