Ascochyta rabiei: EKO05_0011447
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Entry
EKO05_0011447 CDS
T09445
Name
(RefSeq) t-SNARE affecting a late Golgi compartment protein 2
KO
K08489
syntaxin 16
Organism
arab
Ascochyta rabiei
Pathway
arab04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
EKO05_0011447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0011447
Membrane trafficking [BR:
arab04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
EKO05_0011447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
EBV-NA3
ATG17_like
DNA_repr_REX1B
CCDC22_CC
MCPsignal
Motif
Other DBs
NCBI-GeneID:
62220581
NCBI-ProteinID:
XP_038792632
LinkDB
All DBs
Position
22:complement(join(695151..695770,695820..696352,696410..696432))
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AA seq
391 aa
AA seq
DB search
MWRDRTNLFISYRQSYSHHPQKKTRYGGPSSNGFADGRRMSEERQGLMSGGAYDDDGDAV
IEMDLLPPRWLDVQDEITDHLTEIVKQTRKLDQLHQKHVLPGFDDEDVKKREEREIEQLT
QDITKGFQRCQQAIKRIERMVREAKQQGNIHQGEEVMAQNLKISLATRVGEVSAMFRKKQ
SAYLKKLRDLGGFASPFRSATPVQNPYNDPAMQESDADRSFAQSTSLQTKQQRMRHDPNE
AIIAQREREIEDIAQGIIELANIFQELQTMVIDQGSMLDRIDYNVENMSRDVKEADQELK
VASGYQKKSIKRKIMLLLAILIAGVFILLSLKLGTKSSSSPAPAAPAVPDEDAPMVALRT
RRPSSALPTSRIWHRRKRRLWRGLAEDALDF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggaccgcaccaatctcttcatatcctaccgccagtcctattcacaccacccc
cagaagaagacgcgctatggcggacccagctcgaatggcttcgccgacggcagacgcatg
tcggaggagcgccaggggctcatgtccggcggcgcctacgacgacgacggcgacgcggtg
attgagatggacctgctgcctccgcgctggctggacgtgcaagacgagattaccgaccac
ctcaccgagatagtgaagcagacgcgcaagctcgaccagctgcatcagaagcacgtgctc
ccaggcttcgacgatgaagacgtcaagaagagagaggagcgcgagatcgagcagcttacg
caagacatcacaaagggcttccagagatgccagcaggccatcaagcgaatagagaggatg
gtgcgcgaagcaaagcagcagggcaacatccaccagggcgaagaggtcatggcacagaac
ctgaagatatctctggccacacgagtcggcgaagtgagcgccatgttccgcaagaagcag
tctgcgtacctgaagaaactccgcgatctcggtggcttcgcctcgcccttccgatcagca
acgcccgttcagaacccgtacaacgatcctgccatgcaagagtcagacgccgaccgatcc
tttgcacaatctacatccctccagacgaagcagcagcgaatgcgccatgaccccaacgaa
gcaatcatcgcccagcgcgagcgtgaaatcgaggacattgcgcagggcatcatcgagctg
gccaacatctttcaagagctgcagactatggtcatcgaccagggcagtatgctcgatcgc
atcgactacaatgtagagaacatgtccagagacgtgaaagaggcagaccaagagctcaag
gtagcttctgggtaccagaagaagagtatcaagagaaagatcatgctcctgttggccata
ctcattgcgggtgtcttcatcttgctctcgctcaaactgggtaccaaaagcagcagctct
ccagcgccggccgccccagccgtcccagacgaagatgcacccatggtagcgttacggacc
aggcgtccgtcttcggcattaccaacaagtcgcatttggcatcgacggaaaagaaggttg
tggaggggcttagcagaggatgcactcgatttttag
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