Ascochyta rabiei: EKO05_0011499
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Entry
EKO05_0011499 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
arab
Ascochyta rabiei
Pathway
arab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EKO05_0011499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0011499
Spliceosome [BR:
arab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
EKO05_0011499
Complex C
U4/U6.U5 tri-SnRNP related factors
EKO05_0011499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
62220631
NCBI-ProteinID:
XP_038792682
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All DBs
Position
22:complement(825177..826226)
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AA seq
349 aa
AA seq
DB search
MSKPQFDRADASALLDDRGYSGALIRGQNPALLFEKGVRERITESYYWKEQCFGLNAATL
CDRAVELKFIGGTSGITGRPTPFLCLAFKMLQLVPEKAVVLEMLNFRGDEEEEDEEMLNL
RGDEDGEDKEMGVKLETQENGEAKAEEEAKKRDLNAEGKLGTFKYLRCLAAFYIRLAWEP
VEIYTTLEPLLTDYRKIKRRLKENFSLTYVDQFVDDLLTKERICATSLWKLPSRANLEDL
DMLEPRESPLGDEVDLLDEEDERARDRDASVPSDRSARSYRSRSYDSRSRSRSRSYDGRD
RSRSRSRSRSYDSRDRRRSRSPGQGSDARRSRSRSRSRSRSRSRSRGRD
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccccagttcgaccgcgcagacgcgtccgccctcctcgacgaccggggctac
tcgggcgcgctaatccgcgggcagaaccccgcgctgctcttcgaaaagggcgtgcgcgag
cgcatcaccgagtcgtactactggaaggagcagtgttttggtctcaacgcagcgacgctc
tgcgaccgcgccgtggagctcaagttcatcggcggcacgagcggaatcacgggccggccc
acgccgttcctgtgtctcgcgttcaagatgctgcagctcgtgccggagaaggcggtcgtg
ctggagatgctcaacttcagaggggatgaggaggaggaagacgaggagatgctgaacctc
agaggggacgaagatggggaagacaaggagatgggtgtcaagctggagacgcaggaaaac
ggggaagccaaggcggaagaagaggcgaagaagagggacctcaacgctgaggggaaactg
gggacgttcaagtacctccgatgcctggccgccttttacattcgactcgcctgggagccg
gtcgagatctacaccacgctggagccgctactcacagattaccgcaagatcaagcgccga
ctgaaagaaaacttcagcctgacctacgtcgaccagttcgtcgacgacctactcacaaaa
gagcgcatctgcgcaacaagtctgtggaaactgcccagcagagccaacctcgaggacctg
gacatgctggagcccagggagagcccgttgggcgacgaggtggatctcctcgacgaagaa
gacgagcgggcgcgcgaccgagacgccagcgtgccaagcgaccgcagcgcaaggagttac
cggagtcggagctacgacagcagaagtcgcagcaggagcagaagctacgatggcagagat
cgcagcagaagcagaagcagaagcaggagctacgacagccgggaccgccggcgcagtcgc
agtcctggccaagggagtgatgcgcggcggagcaggagcaggagcaggagcaggagcagg
agcaggagcagaagtcgagggcgagactga
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