Rhizosphaericola mali: E0W69_012625
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Entry
E0W69_012625 CDS
T06233
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
arac
Rhizosphaericola mali
Pathway
arac03030
DNA replication
arac03430
Mismatch repair
arac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E0W69_012625 (holA)
03430 Mismatch repair
E0W69_012625 (holA)
03440 Homologous recombination
E0W69_012625 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arac03032
]
E0W69_012625 (holA)
03400 DNA repair and recombination proteins [BR:
arac03400
]
E0W69_012625 (holA)
Enzymes [BR:
arac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E0W69_012625 (holA)
DNA replication proteins [BR:
arac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E0W69_012625 (holA)
DNA repair and recombination proteins [BR:
arac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E0W69_012625 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF3990
Motif
Other DBs
NCBI-ProteinID:
QES89472
UniProt:
A0A5P2G6B2
LinkDB
All DBs
Position
2932743..2933741
Genome browser
AA seq
332 aa
AA seq
DB search
MSAEQIIESWKKNQFKPIYWLEGDEPFFIDQVMQYAENKILTPSEADFNLSVFYGKDADW
AEVVNACRRYPMFAEKQVVVLKEAQQMKDVNVLESYVAKPMPTTIFVVSYKEKKVDARTT
FAKTLKKNGEVLTTKKMYDSQLPDWINQMVKSKGFTITPKALQLVINSIGNDISRISNEI
NKLSVNLEGTTAINEDHIENYIGISKDFNVFEMQSALGNKDLTKAMRIVQYFGSNPKAGP
MQMVLPSLYGFFSKVAMVFAAGSSDTKIIADTIGVNSFFVRDYITAANKYGYPGVEKVLL
LLHEYNLRSIGVHNGGAESAELMKEMVVKMML
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaacaaatcatcgagtcttggaaaaaaaatcaatttaaacctatttactgg
ttagaaggagacgaacctttttttattgaccaagtgatgcaatatgctgaaaacaaaata
cttacaccatcagaagcagattttaacctatctgttttctatggcaaagatgcagattgg
gcagaggttgtgaatgcttgtcgccgctatcctatgtttgcggaaaaacaagtcgtcgta
ctcaaggaagcacaacagatgaaggacgtcaatgtattggaatcttatgtagcgaagccg
atgccaacaaccattttcgttgtgagctacaaagagaaaaaagtggatgcacgcacaaca
tttgccaaaacattgaaaaaaaatggcgaagttctgacgacaaaaaaaatgtacgatagc
caattgcctgattggatcaatcaaatggtcaagtccaaaggatttaccatcactccgaag
gcattacaattggttatcaactcaataggaaatgatatttctagaatttcaaatgaaatc
aacaaactttcggtcaatctagaaggcacaactgcgatcaacgaagatcatatcgaaaat
tacattggcattagcaaagatttcaatgtatttgaaatgcaatcggccttgggaaataaa
gacttaacaaaagcgatgcgtatcgttcaatatttcggttccaaccccaaagcaggtccg
atgcagatggttttaccttctttgtatggcttttttagtaaagtagcgatggtttttgcg
gcaggtagttcggatacaaaaattattgcggacacgattggcgtcaattcttttttcgta
cgagattatattacggctgccaataaatatggatatcctggtgtggaaaaagtgctttta
cttttgcatgaatacaatttacgttcaattggggtacataatggcggagcagaatcagcc
gaattaatgaaagaaatggttgtcaaaatgatgttgtaa
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