Rhizosphaericola mali: E0W69_014555
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Entry
E0W69_014555 CDS
T06233
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
arac
Rhizosphaericola mali
Pathway
arac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
arac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E0W69_014555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arac03021
]
E0W69_014555
Transcription machinery [BR:
arac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E0W69_014555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_Tnp_4
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QES89829
UniProt:
A0A5P2G6D8
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All DBs
Position
complement(3394812..3395339)
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AA seq
175 aa
AA seq
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MEEIKLISALKYCDDTEAYETIFNLHKAKVYGFFLKKTSSEDDAKDLLQNVFLRLWKYRK
TMNEDLLIDQHLFQYAKAVYIDWLRVHKKQTTSIQNESLQYELPHYNPSNDIITILDTDN
LLQLLHSESALNRQIFYLNKMEGYSYHQLSQKFSLSVKSIDNYINKTLKRLKKKL
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatcaaactcatatctgcattaaagtattgcgacgatactgaagcttacgaa
acaatatttaatttacataaggcaaaagtatatggcttttttctgaagaagacatcttca
gaggatgatgcgaaagacttgctccaaaatgtctttcttcgcttatggaaatatagaaag
acaatgaatgaggacttattaatagatcaacatttatttcaatatgccaaagctgtctat
attgattggttaagagttcataaaaaacaaactacatcgattcaaaatgaatcattacaa
tatgagctccctcattataacccatccaatgatattattacgattctagatactgacaat
ttacttcaattactccattcagaatccgccttaaatcgccagatcttctacttaaataaa
atggaaggctattcatatcaccaactttcccaaaaattttctctttctgtaaaaagcatc
gataattatattaataagactttaaaaagattgaaaaaaaaattatga
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