Rhizosphaericola mali: E0W69_017875
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Entry
E0W69_017875 CDS
T06233
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
arac
Rhizosphaericola mali
Pathway
arac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E0W69_017875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arac03021
]
E0W69_017875
03400 DNA repair and recombination proteins [BR:
arac03400
]
E0W69_017875
Enzymes [BR:
arac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E0W69_017875
Transcription machinery [BR:
arac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E0W69_017875
DNA repair and recombination proteins [BR:
arac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E0W69_017875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QES90443
UniProt:
A0A5P2GB58
LinkDB
All DBs
Position
4171018..4172016
Genome browser
AA seq
332 aa
AA seq
DB search
MAILSFQKPDKIILQKATDFEGQFEFRPLEPGFGLTVGNALRRVLLSSLEGYAITGVKIE
GVDHEFATIHGVTEDMTEMILNFKQVRFKKITEQEVTSEKVVLSLKNKTAFTAGDLGEAT
ASFEVMNPDLVICTMDVSAKIDIELTIGKGRGYVPADENVVEDAPFGYIAIDSIYTPIKN
VKFSVENYRVEQRTDYEKLLLDVVTDGTIHPEEAVKQASRIMIQHLMIITDENITFDNKE
DKKEDVVDEQVLQLRKVLKTPLEDLDLSVRAFNCLKAAKINSLSELVQYEQEDLMKFRNF
GQKSLNEIEQVLHDRGLHFGMDLARLGVDDID
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccatattaagctttcagaagccagacaaaatcattctgcaaaaagcaacagatttt
gaaggacagtttgagttcagaccattagagccaggctttggccttaccgtaggtaatgca
ttacgtcgcgtattgctaagctcattggaagggtatgctattacaggtgttaagattgaa
ggtgtagatcatgaattcgcaacaattcatggtgttacggaagatatgactgaaatgatc
ttgaattttaaacaagttcgttttaagaaaatcaccgaacaagaagtaacttctgaaaaa
gtagttctttctttaaaaaataaaactgcattcactgcaggagatttaggcgaagctact
gctagctttgaagtaatgaatcctgatttggttatttgtacaatggatgtatctgctaaa
atcgatatcgaattaactatcggtaaaggtcgtggatatgtaccagctgacgaaaatgtg
gttgaagatgctccatttggttacatcgcgatcgactctatctatactcctatcaaaaat
gtaaaattttcggtagaaaactatcgtgtagaacaacgtactgactatgaaaaattgttg
ttagatgttgttactgacggtactatacatcctgaagaagcagtgaaacaagcatctcgt
attatgatccaacacttgatgatcattacagatgaaaatatcactttcgataataaggaa
gataaaaaagaagatgtagttgacgaacaagtattgcaattacgtaaagtattgaaaact
ccattggaggatttagatctttctgtaagagcattcaactgtttgaaagctgcaaaaatt
aactcattgagtgaattagttcaatacgaacaagaagatttgatgaagttcagaaacttc
ggtcaaaaatctttgaacgaaattgagcaagttcttcacgacagaggtctacatttcggt
atggacttagctcgtctaggagttgatgatattgattaa
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