Acidovorax radicis: KI609_01075
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Entry
KI609_01075 CDS
T08078
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
arad
Acidovorax radicis
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
HTH_8
AAA_2
Xre-like-HTH
Mg_chelatase
HTH_11
PAS
AAA
AAA_16
HTH_20
MLTR_LBD
HTH_23
HTH_7
HTH_Crp_2
PAS_8
HTH_24
TetR_N
AAA_22
DUF815
HTH_28
HTH_17
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UCU99437
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Position
249985..251388
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AA seq
467 aa
AA seq
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MISAPLPADSGSPALPELTAYLDALPEPHILFDRQYRIVAANAAYRRQFGQGAPVVGRTC
HEVSHHSPVPCDQAGETCPLARSVLSGQRERVLHLHHTPRGEDYVQIELVPLRDARGQPS
YFLEKMEPLPIAQSRADAQGMIGRSPPFQAVLELIARVGPSQASVLLLGESGTGKELAAR
AVHQASHRASRALVAVDCASLPETLFESELFGHEKGAFTGAHAARAGLVEAAHGGTLFLD
EVGDIPMTMQVKLLRLLESGTYRRVGQTELRRADIRVVAATHRNLKAMVAEGRFREDLYY
RLSTFPILLPALRDRAEDIALLAHALLERVAPGRALAMAPAAMRRLAQHPFPGNVRELRN
VLERAALLTDGAIVTAPTIERSLAFDAFDGSGAQALVGVFQGAAGPHASHARRDATLRSV
EDAALRLALSTTAATRQELARALGISTRTLYRKLRALGDQSGVGENG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgccccattacccgccgatagcggcagccccgcgctgcccgaactcaccgcc
tacctcgacgccttgcccgagccccacatcctgttcgaccgccagtaccgcatcgtggcc
gccaacgcagcctaccggcgccagtttggacaaggggcgccggtggttgggcgcacctgc
cacgaggtgtcgcaccactcaccggtgccctgcgaccaggcgggcgagacctgcccgctg
gcccgctccgtgttgagcgggcaacgcgagcgtgtgctgcacctgcaccacacgccgagg
ggcgaagactatgtgcagatcgagctggtgccgctgcgtgacgcgcgcggccaaccaagc
tatttcctggaaaagatggagcccctgcctatcgcccagagcagggcagacgcgcagggg
atgatcgggcgttcgccgccattccaggcggtgctggagctcatcgcccgcgtgggccca
tcgcaggccagcgtgttgctgctgggcgagtccggcacaggcaaggagctggcggcgcgg
gccgtgcaccaggcgagccacagggcctcccgtgcgctggtggctgtggactgcgccagc
ctgcccgagaccctgttcgagagcgagctgtttggccacgagaaaggcgccttcacgggc
gctcacgccgcgcgggccgggctggtggaggccgcgcatggcggcaccctgtttctggac
gaagtgggcgacatcccgatgaccatgcaggtcaagctgctgcgcctgctcgaaagcggc
acctaccgccgcgtggggcagaccgagctgcgccgcgcggacattcgtgtggtggccgcg
acccaccgcaacctcaaggccatggtggccgaggggcggtttcgcgaagacctgtattac
cggctcagcaccttccctatcctgctgcccgcattgcgtgaccgggccgaagacatcgcc
ctgctggcccacgccctgctcgagcgcgtggcaccaggccgcgcgctcgccatggccccc
gccgccatgcgccgcctggcgcaacatccctttccgggcaatgtgcgcgagctgcgcaac
gtgctggagcgcgccgccctgctgacagacggcgccatcgtgaccgcgcccaccatcgaa
cggtcgctcgccttcgatgccttcgacggcagcggtgcacaggcgcttgtgggggtattc
cagggcgcggccgggcctcacgcatcccacgcacggcgcgatgccacgctgcgcagcgtg
gaagacgcggcactgcgcttggccctgagcaccacggccgcaacacgccaggagctggcg
cgggcgttgggtatcagcacccgcacgctctatcgcaaactgcgtgcgctgggcgatcaa
agcggagtgggtgaaaacggctaa
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