Acidovorax radicis: KI609_02255
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Entry
KI609_02255 CDS
T08078
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arad
Acidovorax radicis
Pathway
arad03420
Nucleotide excision repair
arad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KI609_02255
03430 Mismatch repair
KI609_02255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arad03400
]
KI609_02255
Enzymes [BR:
arad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI609_02255
DNA repair and recombination proteins [BR:
arad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KI609_02255
MMR (mismatch excision repair)
Other MMR factors
KI609_02255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
Viral_helicase1
AAA_12
ResIII
DEAD
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
UCU99650
LinkDB
All DBs
Position
complement(495290..497290)
Genome browser
AA seq
666 aa
AA seq
DB search
MALPQDIHFKKRYPTLEQNEVLNATASAVLVNALAGTGKTTTLAIKAADLIRTKGASRIL
MLAYSEAGLTAMAQRLENLVPAIPRQVQIMTVEQLCATVLKDQGDALVRVTEPLQKNLLI
RQAHTALTQDPQRQDMPPDVADFLSRDLDVQAFLDFEAQAKQRLLLRDLESSDLGALAYC
HEHELDYGLYQLFVRYERLRSGLNNEPLFYAPGDCTYEVARQLCALDFSEPFTPLQGRFD
AVLFDELQDLDEAAMLVLRTLVQGGNGIFVGVGDFNQHILPGAFSVFGNSLARIRQELPA
DTQVVSLHTTYRFGNAICQGLNPLFGVAFAAHYPTKPAWFEQRSYSDDEDCARQLLAIHE
TVRQEQPHAPGPHAPASLHVVLRSPEDSVLLEWMFAHEGVHYACKGMKRFYQRREIALVL
AIMWAMQGCGDTVRLTQGIVSSAIEGLLRYVRRGSLPDHDVLANGAFDMQALQGDSPVEL
DTRAVAVGLIDQRPLLRRFLAHASFDPTAPVASPICEQLLALPAQVCADAGQLCGHPLIH
QFFAHAPISPDERRDSLDSLRALARICTGLSVDEFLGRVTLMVSTSIQQHQHNEAPSLTL
LTVERCKGHEYDHVAVPFVERGRFPRSAARHDAYRERNMLYVAMTRASKRLWLLESGARP
VSPGPV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggccttgccgcaagacattcacttcaaaaaaagataccccacgctggagcagaacgag
gttctgaacgccacggcgagtgcggtgctggtcaacgccctcgcgggcaccggcaagacc
accacactggcgatcaaggccgccgacctcattcgcaccaagggggcgagccggatcctg
atgctggcctattcggaggcggggcttaccgccatggcgcagcgccttgaaaacctggta
ccggccattccgcgccaggtgcagatcatgaccgtggagcagctgtgtgccacggtactc
aaagaccagggcgacgcacttgtgcgcgtcaccgagccgctgcaaaaaaacctgctgatc
cgccaggcccacaccgcgctcacccaggacccgcaacggcaggacatgccccccgacgtc
gccgacttcctgtcgcgcgatctggacgtgcaggccttcctggactttgaagcccaagcc
aaacagcggctgctgctgcgcgacctcgaaagctcggacctcggcgccttggcgtattgc
catgagcacgagctggactacggcctctaccagctctttgtccgctatgaacgcctgcgc
agcgggctgaacaacgaaccgttgttctatgcaccgggcgactgcacctacgaggtcgcc
cgacagctttgtgcgctggatttcagcgagccctttaccccgctgcaaggccgcttcgac
gccgtccttttcgacgagctgcaagacctggacgaagccgccatgctggtgctgcgcact
ctggtacagggcggcaacggcatttttgtgggcgtgggagacttcaaccagcacatcctg
cccggtgcgttctccgtctttggcaacagcctggcccgcatacggcaggagctgcccgca
gacacccaggtggtctccctccacaccacctaccgcttcggcaacgcgatctgccaaggc
ctcaacccactgttcggcgtggcgtttgccgcgcactaccccaccaagcccgcctggttc
gagcagcgcagctacagcgacgatgaggactgcgcgcggcaactgctggcgatccacgaa
accgtgcggcaagagcagccccatgcaccggggccccacgcgcccgccagcctgcatgtg
gtcttgcggtcgccggaggattcggtgctgctggagtggatgtttgcccacgaaggcgtg
cactacgcctgcaaaggcatgaaacgcttctaccagcgccgcgaaatagccctggtgctg
gccatcatgtgggccatgcagggctgcggcgacacggtgcggctcacgcaaggcatcgtg
agcagcgccatcgaaggcctgctgcgctatgtgcggcgcggcagcctgcccgatcacgac
gtgctggccaacggtgccttcgacatgcaggcgctgcagggagactcccccgttgaactg
gatacccgggccgtggcagtcggtctcattgaccagcggcccctcttgcggcgttttttg
gcgcatgccagcttcgaccccaccgcaccggttgcctcgcccatttgcgagcaattgctg
gccctgcccgcgcaggtgtgcgccgacgcgggccagctgtgtgggcacccgctcatccat
caattcttcgcccacgcgcccatcagccccgacgagcggcgcgatagcctggacagcctc
cgagcgctggcccgcatctgcaccgggctgtctgtggacgagttcctgggccgggtcacg
ctcatggtcagcaccagcatccagcagcaccagcacaacgaggcccccagcctgacgcta
ctgacggtagagcgctgcaagggacatgaatacgaccatgtggcggttccttttgtggaa
cgcgggcgtttcccgcgcagcgccgcccggcacgacgcctaccgcgaacgcaacatgctc
tatgtggccatgacacgggccagcaaacgcctgtggcttttggagagcggcgcgcgccct
gtcagccccggcccggtatga
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