KEGG   Acidovorax radicis: KI609_02730
Entry
KI609_02730       CDS       T08078                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
arad  Acidovorax radicis
Pathway
arad00061  Fatty acid biosynthesis
arad00071  Fatty acid degradation
arad01100  Metabolic pathways
arad01212  Fatty acid metabolism
arad02024  Quorum sensing
arad04146  Peroxisome
Module
arad_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:arad00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    KI609_02730
   00071 Fatty acid degradation
    KI609_02730
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    KI609_02730
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KI609_02730
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:arad01004]
    KI609_02730
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arad04147]
    KI609_02730
Enzymes [BR:arad01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     KI609_02730
Lipid biosynthesis proteins [BR:arad01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   KI609_02730
Exosome [BR:arad04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   KI609_02730
  Exosomal proteins of breast cancer cells
   KI609_02730
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 LPD22 DUF2464
Other DBs
NCBI-ProteinID: UCU99729
LinkDB
Position
complement(600072..602018)
AA seq 648 aa
MKTTFPQLLLKHAAERPHAPALREKEYGIWQSHGWADLARLVEQMAAGLHLAGLQRHEHM
VVIGANRPRLYATMLAAQSLGAIPVPLYQDAVGAECIFPLNNADVRFCVVEDQEQVDKLL
EIREQCPQIARIYFDDPRGLRKYEEEGLASLDALIEAGRAHAAAHPEWFRTEVAKASPDD
VAAMFFTSGTTGNPKGVVHTHSTLIDRASAGAEFDKLTSSEEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESAGTVTIDLKEVGPTYYFAPPRIFEGLLTSVMIRMEDAGTIKRKMFH
ACMEVAKRVGPALMDGEPVGLWDRLQYAIGNALVYGPLRNNLGFSRVRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDNQARADTVGVPIRGVEIKVADNGEILVKSA
GLLKEYYKNPAATAEVLTADGWYHTSDAGFLDGHGHLKIIDRVKDVGRIKGGANDGAMFA
PKYVENKLKFFPHIKEVVALGDGREKVCVMVNIDFDAVGNWAERRNLPYAGYTDLAQKPQ
VYELIRECIEKVNADLATDAMLAGSQVSRFLVLHKELDADDGELTRTNKVRRGFIAEKYA
VLVDALYAGRTEQYIETQVKFEDGRTGSVSATLKLADTKTFAPVKKAA
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgaagaccacgttcccgcaattgctgctcaagcatgcagccgagcgcccccatgccccg
gcacttcgtgaaaaagaatacggtatctggcaaagccacgggtgggccgacctggcgcgc
ctggtggagcagatggccgccggcctgcacctggccgggctgcagcgccatgaacacatg
gtggtgatcggcgccaaccgcccccgcctgtacgccaccatgctggcggcccagtcgctg
ggggccattccggtgccgctgtaccaggacgccgtgggcgcggaatgtatctttccgctc
aacaatgcggacgtccggttttgtgtggtggaagaccaggaacaggtcgacaaactgctg
gagatccgtgagcagtgcccccagattgcacgcatctactttgatgatcctcgtggcctg
cgcaagtatgaagaagaaggcctcgcttcgctggacgcactgatcgaagccggccgtgcc
catgccgcagcccacccagagtggtttcgtaccgaggtggccaaggccagccccgacgac
gtggcagcgatgttctttacctcgggcaccaccggcaaccccaaaggcgtggtgcacacc
catagcaccctgatcgaccgcgcctcggcgggcgccgaatttgacaaactcaccagctcc
gaagaagtgctggcgtatctgccccccgcgtggatcgggcagaacatattcagctacgca
caatggctggcctgcggctatgtcgtcaactgccccgagtcggccggcaccgtgaccatc
gatctcaaggaagtcggtcccacctattactttgcgcccccgcgcatttttgaaggcctg
ctcaccagcgtgatgatccgcatggaagacgcggggaccatcaagcgaaagatgttccac
gcctgcatggaggtggccaagcgtgtgggcccggcgctgatggacggcgaacccgtgggc
ctgtgggaccgcctccaatacgccataggcaacgcgctggtgtacgggccgctgcgcaac
aacctggggttcagccgtgtgcgggtggcctacacagcgggcgaggccatcgggcccgac
ctgttcaccttctaccgctccatcggcatcaacttgaagcagttgtatggctccaccgaa
accgccgtgttcgtgtgcctgcagcccgacaaccaggcccgcgccgacacggtgggtgtg
cctattcgcggcgtggagatcaaggtggccgacaacggagagatcctggtcaaatccgcc
ggtctgctcaaggaatactacaagaaccctgccgccacggccgaggtgctgacggccgac
ggctggtatcacaccagcgatgcgggctttcttgatggtcacggccacctcaagatcatc
gaccgggtgaaagacgtgggccgcatcaagggcggcgccaacgatggcgccatgtttgcg
cccaagtacgtggagaacaagctcaagttcttcccgcacatcaaggaagtcgtcgctctg
ggcgacggccgcgagaaggtgtgcgtgatggtcaacatcgacttcgacgcggtgggcaac
tgggccgagcgccgcaatctgccgtatgcaggctacaccgacctggcgcaaaagccgcag
gtgtatgagctgatccgcgagtgcatcgagaaggtcaacgcagacctcgccaccgacgcc
atgctggcgggcagccaggtgagccgtttcctggtgctgcacaaggagctcgatgccgac
gacggtgaactcacgcgcaccaacaaggttcgccggggtttcatcgccgaaaaatatgcc
gtgttggtggacgcactctatgcgggccgcaccgagcaatacatcgagacgcaggtcaag
ttcgaggacggacgcacgggcagcgtaagtgccaccctgaagctggcggacaccaaaacc
tttgcgccggtcaagaaggccgcgtga

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