Acidovorax radicis: KI609_05195
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Entry
KI609_05195 CDS
T08078
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
arad
Acidovorax radicis
Pathway
arad00300
Lysine biosynthesis
arad00470
D-Amino acid metabolism
arad01100
Metabolic pathways
arad01110
Biosynthesis of secondary metabolites
arad01120
Microbial metabolism in diverse environments
arad01230
Biosynthesis of amino acids
Module
arad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KI609_05195 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KI609_05195 (lysA)
Enzymes [BR:
arad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KI609_05195 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
UCV00183
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All DBs
Position
1160751..1161995
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AA seq
414 aa
AA seq
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MSNPFTPAQLWSLADQFGTPLWVYDAATIRQRIAQVSNFETIRFAQKACSNIHILKLMRE
QGVKVDAVSRGEILRALAAGYQAGGEPSEIVFTADLFDAATLDCVVEHGVPVNAGSIDML
HQLGARSPGHSVWLRINPGFGHGHSNKTNTGGEHSKHGIWHTDLPAALAAIKQHGLKLVG
LHMHIGSGVDYSHLQEVCGAMVNLVRMAHAAGHDLHAISAGGGLSIPYRSGDPVVDTQHY
HGLWDAARQQAEAIVGHQLGLEIEPGRYLVAESGVLLGQVRATKNAGNNHFVLVDTGFNE
LMRPSMYGSYHAMSVLRRDGSTAAEQPTVVAGPLCESGDVFTQGDGGVVLPRELPAAQVG
DLLVIHDTGAYGASMSSNYNTRPLIAEVLVDGGQARLIRRRQTVDELLALEQGL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccttttacgcccgcccagctgtggtcgctggccgaccagttcggcacccct
ttgtgggtgtatgacgcggccaccatccgccagcgcatcgcgcaggtgtccaatttcgag
accatccgctttgcgcagaaggcctgctccaacatccacatcctcaaactcatgcgcgag
cagggcgtgaaggtggacgccgtctcgcgcggcgagatcctgcgtgcgctggcggcgggc
taccaggccggtggcgagccgtccgagatcgtcttcaccgccgacctgtttgacgccgcc
acgctggactgcgtggtggagcatggcgtgcccgtcaacgctggctcgatcgacatgctg
caccagctgggcgcgcgctcgcccggccatagcgtctggctgcgcatcaaccccggcttt
ggccatggccacagcaacaagaccaacaccggcggcgagcacagcaagcacggcatctgg
cacaccgacctgcctgcggcgctggctgcgatcaagcagcacggcctgaagctggtgggc
ctgcacatgcacatcggctcgggcgttgattacagccacttgcaggaagtgtgtggcgcc
atggtcaacctggtgcgcatggcccatgcggcggggcatgacctgcacgccatctcggcg
ggcggcggcttgtccattccgtaccgcagtggcgacccggtggtcgatacgcagcactat
cacggcctgtgggacgccgcgcgccagcaggccgaggccatcgtaggccaccaactcggt
ctggagatcgagccgggccgctacctggtggccgaatcgggcgtgctgctgggccaggtg
cgcgccaccaagaacgcgggcaacaaccacttcgtgctggttgatacgggcttcaatgaa
ctcatgcgcccgtcgatgtacggcagctaccacgccatgagcgtgctgcgccgcgatggc
tccacggcggcagagcagcccacggtggtggcgggcccgctgtgcgagtcgggcgacgtg
ttcacgcagggtgacggcggtgtggtgctgccgcgtgagctgcctgcagcccaggtgggt
gatctgctggtgattcacgacaccggggcttatggcgcttcgatgtcctccaactacaac
acgcgtcccctgattgccgaggtgctggtcgacggtggccaggcccgcctgatccgccgc
cgccagacggtggacgagctgctggcgctggagcaaggcctgtaa
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