Acidovorax radicis: KI609_06415
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Entry
KI609_06415 CDS
T08078
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
arad
Acidovorax radicis
Pathway
arad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KI609_06415 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arad03019
]
KI609_06415 (orn)
03009 Ribosome biogenesis [BR:
arad03009
]
KI609_06415 (orn)
Messenger RNA biogenesis [BR:
arad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KI609_06415 (orn)
Ribosome biogenesis [BR:
arad03009
]
Eukaryotic type
Pre-60S particles
RNases
KI609_06415 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
UCV00409
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All DBs
Position
1401672..1402250
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AA seq
192 aa
AA seq
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MSEALNPAPASLAKSDQNLVWLDCEMTGLDPEAERLLEIAVVVTGPNLEPRIEGPVFVIH
QSDELLNKMDAWNKGTHGRSGLIEKVKTSTVTEEDAERQIIEFLSRYVPKGVVPMCGNSI
GQDRRFLVRYMPKLERFFHYRNVDVSTLKELAKRWKPAAYTSFKKAQKHTALADVHESID
ELAHYRTHLLSV
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagccttgaaccccgcacctgcctcgcttgccaaatccgaccaaaaccttgtc
tggctcgattgtgaaatgaccggcctggaccccgaggcagagcgcttgctcgagattgcc
gtggtcgttaccggccccaacctggagccgcgcatcgaaggcccggtgtttgtcattcac
cagtccgatgaactgttgaacaagatggatgcctggaacaaggggacccacgggcgcagc
ggattgatcgaaaaagtaaaaacttctacggtgaccgaagaagacgccgagcggcagatc
attgagttcctcagccgctatgtgccaaagggggttgtgcccatgtgtggcaacagcatc
ggacaggaccggcggtttctggtgcggtacatgcccaagctggagcggttctttcactat
cgcaatgtcgacgtgagcaccctcaaggagttggccaagcgctggaaacctgcggcttac
acgagcttcaagaaagcccagaaacacacggcgctcgccgatgtgcacgagtccatcgac
gagttggcgcactaccgcacccatcttctgtcggtctga
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