Acidovorax radicis: KI609_06460
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Entry
KI609_06460 CDS
T08078
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arad
Acidovorax radicis
Pathway
arad03420
Nucleotide excision repair
arad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KI609_06460
03430 Mismatch repair
KI609_06460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arad03400
]
KI609_06460
Enzymes [BR:
arad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI609_06460
DNA repair and recombination proteins [BR:
arad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KI609_06460
MMR (mismatch excision repair)
Other MMR factors
KI609_06460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Sp-DndD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UCV00416
LinkDB
All DBs
Position
1411970..1414444
Genome browser
AA seq
824 aa
AA seq
DB search
MFPQDPFSGAPEALVPPHAGAASAASPLLANLNDEQLAAVTLPTGHALILAGAGSGKTRV
LTTRIAWLLQNGYATPGGILAVTFTNKAAKEMVARLSAMLPVNVRGMWIGTFHGLCNRLL
RAHHKAAGLAQSFQILDTQDQLSAIKRLCKQHNVDDERFPPKQLSYFIANCKEEGLRPGD
VQTNDSDARRKVEIYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIREHYQRRFQHILV
DEFQDTNKLQYAWLKQLAGNEVDGRFEARGSVIAVGDDDQSIYAFRGARVGNMTDFVREF
DVQRQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGAGEPVRVYEASSDLAEAQ
WMVDEIKQLVRNDGFERKEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFERAEIKH
ALAYLRLLENPHDDTSFTRVVNFPPRGIGARSIEVLQDAARAAGCSLHDAVSAVPGKAGA
NLGAFVSMVDVLREQTQGLNLRGIIEQMLESTGLIEHFRTEKEGADRIENLQELVNAAES
FVTQEGFGRDAVALPLDEHGTPLGQSAQSPVSQGLDPNAPVLDEPLRPAIPGIVDIDTGE
TLSPLAAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGMEEGLVPHENSS
TERDGLEEERRLMYVAITRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELPESALKWITP
KQQGFGSYAPSFAPKSGAGSAYGSSARGQFDFKSETFASPPVPVQKTAPSHGLRAGINVF
HTKFGEGKVLAIEGSGDDARAQVNFPRHGTKWLALSVAKLTVVE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacaagacccgttttcgggcgcgccagaagccctggtgcccccacacgccggt
gcggcctcggccgcgtcgcccctcctggccaacctgaacgacgagcaactggctgccgtc
acgctgcccacaggccatgcactcatcctggcgggggcgggctcgggcaagacccgggtg
ctcaccacccgcatcgcctggctgctgcaaaacggctacgccacgcccggcggtattctg
gccgtcaccttcaccaacaaggccgccaaggagatggtggcccgcctgtcggccatgctc
ccggtgaatgtgcgcggcatgtggatcgggaccttccacggcctgtgcaaccgcctcttg
cgcgcgcaccacaaggcggcggggttggcgcagtcgtttcaaattttggacacgcaagac
cagctctcggccatcaaacgcctgtgcaagcagcacaacgtggatgacgagcgttttccg
cccaaacagctgtcctatttcatcgccaactgcaaggaagaaggcctgcgccccggcgac
gtgcagacgaatgacagcgacgcgcgcagaaaggtcgagatctaccagctgtacgaagaa
caatgccagcgcgaaggggtggtggactttggcgagctgatgctgcgcagctatgagctg
ctgcgcgacaacgaccccatccgcgagcattaccagcgccggttccagcacatcctggtc
gacgagtttcaggacacgaacaagctgcagtacgcctggctcaagcaactggcgggcaat
gaggtggacgggcgttttgaagcgcgtggcagcgtgatcgccgtgggcgacgacgaccag
agcatctacgccttccgtggcgcgcgcgtgggcaacatgaccgacttcgtgcgcgaattt
gatgtgcagcgccagatcaagctcgagcagaactaccgcagctacagcaacattcttgat
tcggccaacgccctcatcagccacaacagccgccgcctgggcaagaacctgcgcaccacg
cagggcgcgggcgagccggtgcgtgtgtacgaggccagctctgatctggccgaggcgcag
tggatggtcgatgagatcaagcagctggtgcgcaacgacggctttgagcgcaaagagatt
gccgtgctctaccgcagcaacgcgcaaagccgggtgatcgaatcggcgctgttcaacgcc
agcgtgccctaccgtgtgtacggcggcctgcggttttttgaacgtgcagaaatcaagcac
gcgctggcctacctgcgcctcttggagaacccgcacgacgacaccagcttcacgcgcgtg
gtcaactttccgccgcgtggcatcggcgcgcgcagcattgaggtgctgcaagacgctgcc
cgcgccgcaggctgctcgctgcacgacgcagtgagcgccgtgcccggcaaggcgggcgcc
aacctgggcgctttcgtgtccatggtggatgtgctgcgcgagcagacgcagggcctgaac
ctgcgcggcatcatcgagcagatgctcgaatccacggggctgattgagcactttcgcacc
gaaaaagaaggcgccgaccgcatcgagaacttgcaggaactggtcaacgccgccgagagc
tttgtcacgcaggaaggctttggccgcgacgccgtggcgctgccgctcgatgagcacggc
acgccgctgggccagagcgcgcaaagcccggtgagccaaggtctggacccgaatgcgccc
gtgctggacgagcctttgcgacccgccatccccggcatcgtggacatcgacactggcgaa
accctttcgcccctggccgccttcctgacccacgccgcgctggaggccggtgacaaccag
gcccaggccgggcaagacgccgtgcagctcatgaccgtgcacgccagcaagggccttgaa
tttgatgccgtgttcatcggtggcatggaggaggggttggtcccgcacgaaaactcttct
accgaacgcgacggcctcgaagaagaacgccgcctgatgtacgtggccatcacccgcgcg
cgcaagcggctgtacctgagccattcgcaaacgcgcatgctgcacggccagacgcgctac
aacgtcaagagccgtttctttgacgagctgcctgaaagcgcgctcaagtggatcacgccc
aagcagcaggggtttggctcgtatgcgccgagttttgctcctaaatcaggagctggtagc
gcttatggatcaagcgctagaggccaatttgacttcaaatccgagacattcgccagcccg
ccggtgcccgtgcagaaaaccgcgccatcgcacggtttgcgcgcggggatcaacgtgttc
cacaccaagtttggcgaaggcaaggtgctggccatcgaaggctcgggtgacgacgcacgc
gcacaggtcaacttcccgcgccacggcaccaagtggctggcgctgagcgtggccaagctg
acggtggtggagtga
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