Acidovorax radicis: KI609_08985
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Entry
KI609_08985 CDS
T08078
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
arad
Acidovorax radicis
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arad03400
]
KI609_08985
Enzymes [BR:
arad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI609_08985
DNA repair and recombination proteins [BR:
arad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KI609_08985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UCV00855
LinkDB
All DBs
Position
1973213..1975771
Genome browser
AA seq
852 aa
AA seq
DB search
MTVIARSDRCAALWQRVLQEVVAHMHRLKAHPARTVVLVPYAQLMPWAQRYWDMHHTDGF
APRFETTRNWAQQLAAFVPQGDDLAGDVARDTLTARALLDRVGLSAQRDVLAVPLQEAAT
QLLPVVAAIAPVDRAAWGLQARSLLPEADEGSTLRFEAVVARIALEWVLASRHATDVLFE
PGVRSSVDALVVLQGFQVEPLAQALQAHWGDSALAWALPPATLDGQPRGPIALHVAQDAE
DEAQRAAACVLAHIVAGRTPVALAANDRALTRRIGAHLASAGVAVRDENGWTLSTTRAAA
QLMGALKACAWDASADTLLDWLKQAPAVDQATIDTLEKTLRRAQVASWSAAVARSWAGSG
ADTPALAACVALAEGWREGLRAARPLVQWLEALRGLLTATGQWEALSEDAAGARVLAVLR
LQAGQGVELDGWDSAGRRMTLAEFTRWANEVLEAARFVPTPQGDAPVVVLPLPQLLARPF
AALVLPGCDEKRLQPSPEPLGDWTQAQRMALGLPTRDTLEAAQRAAWAHALQTPAVDLLW
RTGDEGGEPLMASPLVLALHLANAAHEGVDDRSQRLVTATPTLRPMPHAEALPVHRLSST
AYSDLRHCPYRFFALRQLGLQDADELAAEMDKRDFGNWLHAVLQHFHEALLADPEDDTLA
RVARMDSAAQAVTQEQGVNEGDFLPFAAGWPQVRDGYLRWLAQHEATGARFQRAELQTTQ
PLGALQLVGTIDRIDAVSTTGEPTALVIDYKTENDTVTRKRIGAGAEDTQLAFYAALLSH
DTLRAAYVNVGERGETQMHEQDDVVHLRDLLVEGIQHDFDRIAQGAPLPALGEGAVCDYC
TARGLCRKDFWK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatagcgagaagtgatcggtgcgctgcgttgtggcagcgtgttttgcaggag
gtcgtggcgcatatgcaccgcctcaaggcgcatccggcgcgcacggtggtgcttgtgccc
tatgcacagctcatgccctgggcgcagcgctactgggacatgcaccacaccgacggcttt
gccccccgctttgaaaccacgcgcaactgggcccagcagcttgccgccttcgtgccgcag
ggcgacgatctggccggtgacgtggcacgcgacacgctcaccgcacgcgcgctgctcgat
cgcgtcgggctctctgcccagcgtgatgtgctggccgtgccgctgcaagaggcggccacc
cagctcctgcccgttgtggctgcgattgcgccagtggacagggccgcttggggccttcag
gcgcgcagcctgctgcccgaagcagacgagggctccacgctgcgttttgaagccgtcgtg
gcccgcattgcgcttgaatgggtgctggcctcgcgccatgccacggacgtgttgttcgaa
cccggcgtgcgctcgtcggtggatgcactggtcgtgttgcaggggtttcaggtcgaaccg
ctggcgcaggcgttgcaggcccattggggcgacagcgccttggcctgggcactgccgccc
gcaacgctggatggacaaccccgcggcccgattgcgctgcacgttgcacaggatgccgag
gacgaagcgcagcgcgccgccgcctgtgtgctggcgcacattgtggcgggtcgcacaccg
gtggcgctggccgccaacgaccgcgcgctcacgcgccgcatcggcgcgcacctggccagt
gccggggttgcggtgcgcgatgaaaacggctggacgctgtcgaccacgcgtgcggcagca
cagttgatgggcgcgctcaaggcctgcgcctgggacgcgtctgcggacaccctgcttgac
tggctgaaacaggcccccgctgtggatcaggcgaccatcgacacgctggaaaaaacgctg
cgccgggcccaggtggcgagctggtcggccgcagtcgcccgttcctgggctgggtccggg
gccgacacacccgccctggcggcctgtgtggcgctggcggaggggtggcgcgagggcctg
cgtgcggcacgcccgctggtgcagtggctggaggccctgcgtggcttgctgacggccacc
ggccagtgggaggcgctgtcagaggatgccgcaggggcccgcgtgcttgccgtgctgcgc
ttgcaggcagggcagggggtggagctggatgggtgggatagcgccgggcgccgcatgacc
ttggccgagttcacccgttgggccaacgaggtgctggaggcggcccgttttgtgcccacc
ccgcagggcgatgcacccgtggtggtgttgcccctgccgcaactgctggcccggcccttt
gctgcgctggtgttgcccggctgcgatgaaaaacgcctgcaaccctcgcccgagccgctt
ggcgactggacgcaggcgcaacgcatggccttgggcttgcccacccgcgacacgctcgaa
gccgcgcagcgcgccgcatgggcccatgcactgcaaacgcctgcggtggacctgctctgg
cgcacgggcgatgagggcggcgagcccctgatggccagcccgctggtgcttgcgctgcac
cttgccaacgcagcccacgaaggtgttgacgaccgcagccagcgcctagtcacggccacg
cccacgctgcggcccatgccgcatgccgaggcgctgccggtgcatcgcctgtcgtccacg
gcgtattccgacctgcggcattgcccctaccgattttttgccctgcgccagctcggcctg
caagatgccgacgagctggccgccgaaatggacaagcgcgactttggcaattggctgcac
gccgtgctgcagcattttcatgaagcgctgctcgccgacccggaggacgacaccctggcc
cgcgtggcgcgcatggacagtgccgcacaggccgtgacccaggagcaaggcgtgaacgaa
ggggactttttgccctttgccgcgggctggccgcaggtgcgcgacggctacctgcgatgg
ctggcgcaacacgaagccacgggcgcccgttttcagcgggccgagttgcagaccacccag
ccattgggcgcgctgcagctggtgggcaccatcgaccgcatcgatgcggtctcgaccacc
ggcgagcccactgcgctggtcatcgactacaaaaccgagaacgacaccgtcacgcgcaag
cgcatcggcgcgggcgccgaagacacgcaactggccttttacgccgcgctgctgagccac
gacacgctgcgtgctgcctacgtcaacgtgggcgagcggggcgagacgcagatgcacgag
caggacgacgtggtgcacctgcgcgacttgctggtcgaaggcatacagcacgactttgac
cgcattgcccaaggcgcgccgctgcccgctttgggtgagggggcggtgtgcgactactgc
accgcccgcggcttgtgccgcaaggatttctggaaatga
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