Acidovorax radicis: KI609_08990
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Entry
KI609_08990 CDS
T08078
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
arad
Acidovorax radicis
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arad03400
]
KI609_08990
Enzymes [BR:
arad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI609_08990
DNA repair and recombination proteins [BR:
arad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KI609_08990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
DUF7216
NifQ
DEAD
Rpn9_C
Motif
Other DBs
NCBI-ProteinID:
UCV00856
LinkDB
All DBs
Position
1975804..1979379
Genome browser
AA seq
1191 aa
AA seq
DB search
MTAAYEHNGQPVSREAFYAIACDPARSVAVEACAGAGKTWMLVSRMLRALLDGAAPHEIL
AITFTKKAAGEMRQRLQEWLEQFAQAPLDTLTAELVTRGISPQRALDKREALQNLYQQML
ASGRPAQIRTFHSWFAALLGTAPLALLQAQGLPAHFELLEDDAEAVREVWGPFLHTVSSS
AGLRADYEAVVAQHGRSQTHKALAAALAKRVEFDLADEAGVVDASVPPFQVQYPDLAGLD
EPAGALQGDASHQRWLARAKALGAESNKTPQKAADAIIDALACGDLNQRLDLLRRAMFVA
KEDRLSKNLEKFAAAQEAEPELQRLLTARRQHAAWQHQQRMARLARCLIAAFAAVKHQHG
WVDMNDVERTALVMLDDPILSGWVQERLDARIRHLLVDEFQDTNPLQWQALHAWLSGYAG
SGGGASGQKPPSVFIVGDPKQSIYRFRRAEPQVFIAAQAFVRDGLGGDLLSCDHTRRNAT
GVIAAVNHVMGTAQAQHETSGFRDHTTESTDPGVLLRLPAILPPDADGGGSTDPLAWRDS
LTEPRHEPEETQRMRECTQAAAWVAAQIAQGTPPHEVLVLARKRDRLAAMQEALRALHLP
CVQPEKADLFDAPEVQDIVALLDALVSTGHDLSLARALKSPLFGLSDDALVALAVLRRQP
AHAGCSWFDLLQKSELLPLDTQALAPVLTQYKAWVDTLPPHDALHAIYQHGDVLARFAAA
APAAQRTAVLANLRALLSAALQHDGGRYLTPYAFVRAMKKGGVRAPGRVDAQAIRLLTVH
GAKGLEARCVLLLDTDTRSQKAETMGVLVDWPGEQAVPTGFVFLASESNPPPSAEATLAA
EQQARQREELNMLYVAMTRAKHCLALSAVQPSTSAPGSWWNRLAPVVGDVVWPPPEGAPD
TTGSGDTTGQQPAAPGQPHDQFTLAELPVLPAPLRGSLPATSPGLQPAQAKAGAPVDVTV
ATSTATSTAASRLGEAMHQLLEQAGVAGAALADLRTAGWPAVRVARLAQDFDITPGAAQQ
AAHTAQRILAGEGAWAWAPAAVDTAINEAPLRHQGQSLRLDRLVHCHQPPERAGWWVLDY
KSAAEPERQAVLLAQLQRYRDAVQLQVPGEPVHAALLTGDGRLVRVAARAAAVGHTLAPA
GAEAADTAPAPPVQVPVPVPVPVPQAPPSAAHKAPHIPDANDANDVQGSLF
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcctacgaacacaatggccagcccgtctcgcgcgaggccttttatgccatc
gcctgtgatcctgcgcgcagcgtggcggtggaggcctgcgcgggcgctggcaagacctgg
atgctggtgtcgcgcatgctgcgcgccttgcttgacggcgctgcgccgcacgagatcctg
gccatcaccttcaccaagaaggcagcgggcgaaatgcgccagcgcctgcaagagtggctg
gagcaatttgcccaggccccgctcgacaccttgaccgccgagctggttaccaggggaatc
agcccccaacgcgcgctggataagcgcgaggcgctacaaaatctataccaacagatgctg
gccagcggccgcccggcgcagatccgcaccttccacagctggtttgcagcgctgctgggc
acggccccgctggcgctgctgcaggcccagggcctgcccgcccactttgagttgcttgaa
gacgatgccgaggccgtgcgcgaggtgtggggcccgtttttgcacaccgtgtcttccagc
gccgggctgcgggccgactacgaagccgtggtggcccagcacgggcgctcgcaaacccac
aaggcgctggcggcggcgctcgccaagcgcgtggagttcgaccttgccgacgaagccggt
gtggtggatgcatccgtgccccctttccaggtgcaataccccgacctggcggggctggat
gaaccggccggggcgctgcagggtgacgccagccaccagcgctggctcgcgcgggccaag
gcgctgggggccgaatccaacaagaccccccaaaaggccgccgacgccatcatcgatgcg
ctggcctgcggcgacctgaaccagcgcctggacctgctgcgccgtgcgatgttcgtggcc
aaggaagaccggctgtccaagaacctcgaaaagtttgccgccgcgcaagaggccgagccc
gagctgcagcgcctgctgaccgcccgccgccagcacgcggcctggcaacaccagcagcgc
atggcccgcctggcgcgttgcctgattgcggcgtttgccgccgtcaagcaccagcacggc
tgggtggacatgaacgatgtggagcgcaccgcgctggtcatgctggacgatcccattctc
tcgggctgggtgcaggagcgcctcgacgcccgcatccgccacctgctggtggacgagttc
caggacaccaatccgctgcagtggcaggcgctgcacgcctggctgtcgggctatgcgggc
tcgggcggcggcgccagtggccagaagccgcccagcgtgttcatcgtgggcgaccccaag
cagagcatctaccgctttcgccgtgccgagccgcaggtgttcatcgccgcgcaggccttt
gtgcgcgacggcctcgggggcgacctgctcagctgcgaccacacgcgccgcaacgccacg
ggcgtgatcgccgccgtgaaccacgtgatgggcaccgcccaggctcagcacgagaccagc
ggctttcgcgaccacaccaccgagtccacagaccccggcgtgttgctgcgcctgccggcc
atcctgccgcccgatgccgatggtggcggcagcaccgacccgcttgcctggcgcgacagc
ctgaccgagccgcgccacgagcccgaagaaacccagcgcatgcgcgaatgcacgcaggcc
gccgcttgggtggccgcgcagattgcgcaaggcacgccgccccatgaagtgctggtgctg
gcgcgcaagcgcgaccggctcgccgccatgcaagaggcgctgcgtgccctgcacctgccc
tgcgtgcagcccgaaaaggccgacctgttcgacgcccccgaggtgcaggacatcgtggcg
ctgctcgacgcacttgtgtccaccgggcatgacctttcgctggcgcgtgcgctcaagtcg
ccgctgtttggcctgtccgatgacgcgctggtggcgttggccgtgttgcgccgccagccc
gcacatgcaggctgcagctggttcgatctgcttcaaaaaagtgagctgttgccgcttgat
acacaagcgctagcgcctgttttgactcaatacaaagcctgggtagacactttgccgccc
cacgatgccctgcacgccatctaccagcatggcgatgtgctggcgcgttttgcggcggcc
gcgcctgcagcgcagcgcacggcggtgctggccaatctgcgcgcgctgctgtcggccgcg
ctgcagcacgatggaggccgctatctcacgccctatgcgtttgtgcgcgccatgaaaaaa
ggtggcgtgcgcgcgccgggccgggtcgatgcgcaggccattcgcctgctcaccgtgcac
ggcgccaaggggctggaggcccgctgcgtgctgctgctcgacaccgacacccgatcccaa
aaggccgagaccatgggcgtgctggtggactggcccggcgagcaggcggtgcccacgggt
tttgtgtttttggccagcgaatcgaacccgccccccagcgccgaggccaccctggccgcc
gagcagcaggcccgccagcgcgaagagctcaacatgctctacgtggccatgacgcgggcc
aaacattgcctggcgctgtcggcggtgcagccctccacgtcggcccccggcagctggtgg
aaccgactggcgcccgtggtcggcgatgtggtgtggccgccgcccgaaggtgcacccgac
acaaccggttcaggcgacacaaccgggcaacagcccgcagcaccaggccagccacacgac
cagttcaccctggccgagctgcctgttttgccagcccctctgcggggctctttgcccgcc
acgtcacccggcttgcagccagcgcaggcaaaggccggggctccggtggatgtgacggtg
gccacctctaccgctacctccaccgccgcatcccgcctgggcgaagccatgcaccaattg
ctggagcaggccggtgtggccggtgcggcgctggccgatctgcgcacggcgggctggccc
gccgtgcgcgtggcgcggctcgcgcaagatttcgacatcacacctggcgccgcgcagcag
gccgcacacaccgcgcagcgcatcctggcgggcgagggcgcctgggcctgggcccccgcc
gccgtggacaccgccatcaacgaagcaccgctgcgccaccaggggcaaagcctgcgcctg
gatcgcctggtgcattgccaccagccgcccgagcgcgcgggctggtgggtgctggactac
aaaagcgcggccgagcccgagcgccaggccgtgctgttggcgcagctgcagcgttatcgc
gacgccgtgcagctgcaggtgcccggcgagccggtgcatgccgcgctgttgactggcgac
gggcgcttggtgcgggtggcagcgcgcgcagcagcggtcgggcatactctcgcccccgct
ggcgctgaggctgccgacacagcgcccgcaccgccagtgcaggtgccagtaccggtgcct
gtacctgtgccccaggccccacccagcgcagcccacaaagcgccacacattcccgacgcc
aacgacgccaacgatgtccaaggctccctgttctga
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