Acidovorax radicis: KI609_12380
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Entry
KI609_12380 CDS
T08078
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
arad
Acidovorax radicis
Pathway
arad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI609_12380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arad03000
]
KI609_12380
03400 DNA repair and recombination proteins [BR:
arad03400
]
KI609_12380
Enzymes [BR:
arad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KI609_12380
Transcription factors [BR:
arad03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KI609_12380
DNA repair and recombination proteins [BR:
arad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KI609_12380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HTH_23
HTH_Tnp_ISL3
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
UCU97407
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Position
2725002..2726639
Genome browser
AA seq
545 aa
AA seq
DB search
MIQPMTLAKPPSLAATATAAETASDEGRYLAVLARDARFDGHFFTAVTSTGIYCRPVCAV
RAPRRENCRFYALAAQAESAGFRPCLRCRPEVAPQALVWSVQDASGILVQQAVRLLDAPD
LWPHPSTPGTPGEGATVARLAQRLGVSDRHLRRIFEAALGVSPLQYLQTRRLLTAKQLLT
DTAMPVTQVALASGFASVRRFNAAFAGHYGLNPTQLRRSGVDSTTSPGAGRTSALRLAWR
PPFDVAALLAFFEKRQFHGVEWVVHGTDGPGLRRTVRLPSTRTGLPQETTGWLSARFDAT
RHQVVLQTSDSLYPVLPLVIRRVRAMLDLDADPAAINAVLHPHFPEGDGLRVPGAFDGFE
LAVRAVLGQQITVAAARTLGQRLVERLGEPIETPWPELHRLFPTATTLANADGDTLGQLG
IVRQRQAAIVALARAVDSGALALHAGADVEKTTAALCALPGIGDWTAQYIAMRVLRWPDA
FPAADVALHKALSVQGHKNPARAAAEASQAWRPWRSYAVLRAWAAGSIASPAPPRQPIHY
KNNRC
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgattcagcccatgacattggccaaaccgccctcccttgccgctaccgcaaccgccgca
gaaaccgcgtcggacgagggccgctacctggccgtgctggcccgcgatgcacggtttgac
gggcactttttcaccgcagtgacctccaccggcatctactgccgcccggtgtgcgccgtg
cgcgcgccccggcgtgaaaactgccgcttctatgccctggccgcgcaggccgagagtgcc
gggtttcgcccctgcctgcgttgccggcccgaggtcgcaccccaggcgctggtgtggtcg
gtgcaggacgccagcggcatcctggtgcagcaggccgtgcgcctgctcgatgcccccgat
ctgtggccgcacccttcgaccccgggcaccccgggtgaaggtgccaccgtggcccgcctg
gcacagcgcctgggtgtgagcgaccgccacctgcggcgcatctttgaagccgcgctgggt
gtctcgccgctgcaatatctgcagacccggcggttgctcacggccaaacagctgctcacc
gacacggccatgcccgtgacgcaggtggcgctggccagcggttttgccagcgtgcgccgc
ttcaacgccgcgtttgccgggcactatggcctgaaccccacccagctgcggcgcagcggc
gttgatagcacgaccagtccgggcgcgggccgcaccagcgcactgcgactggcctggcgc
ccgccctttgatgtggccgccctgctggccttttttgaaaaacggcagttccatggcgtg
gaatgggtcgtgcacggcaccgacggccccggcctgcgccgcacggtgcggctgcccagc
acccgcaccggattgccgcaagaaaccactggctggctcagtgcccgttttgacgcaacc
cgccaccaggtggtgctgcagaccagcgacagcctgtaccccgtgctgccgctcgtgatc
cgccgcgtgcgcgccatgctcgaccttgatgccgacccggccgccatcaacgctgtgctg
cacccccacttccccgaaggcgacggcctgcgcgtgcccggtgcatttgacggcttcgag
ctggccgtgcgtgccgtgctgggccagcagatcaccgtggccgccgcccgcacgctgggc
cagcgcctggtggagcggctgggtgagcccatcgaaacgccctggcctgagctgcaccgg
ctgttccccaccgccacgaccttggccaacgccgatggcgacacgctgggccagttgggc
atcgtgcgccagcgccaagccgccatcgtcgcgctggcccgggcggtggacagcggcgct
ttggccctgcatgcgggcgccgatgtcgaaaaaaccaccgccgccctgtgcgccctgccc
ggcattggcgactggacggcccagtacatcgccatgcgggtgctgcgctggcccgacgcc
ttcccggccgcagatgtggcactgcacaaggcgctgtctgtgcaggggcacaagaacccg
gcccgcgccgctgccgaggcctcgcaggcgtggcggccctggcgcagctatgcggtgctg
cgtgcgtgggcggcgggcagcatcgccagccccgccccgccccgccaaccgattcactac
aaaaacaatcgctgctag
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