Acidovorax radicis: KI609_14370
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Entry
KI609_14370 CDS
T08078
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
arad
Acidovorax radicis
Pathway
arad03030
DNA replication
arad03430
Mismatch repair
arad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KI609_14370 (dnaX)
03430 Mismatch repair
KI609_14370 (dnaX)
03440 Homologous recombination
KI609_14370 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arad03032
]
KI609_14370 (dnaX)
03400 DNA repair and recombination proteins [BR:
arad03400
]
KI609_14370 (dnaX)
Enzymes [BR:
arad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KI609_14370 (dnaX)
DNA replication proteins [BR:
arad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KI609_14370 (dnaX)
DNA repair and recombination proteins [BR:
arad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KI609_14370 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_14
AAA_16
AAA_30
AAA_5
AAA_19
Rad17
nSTAND3
TsaE
PIF1
AAA_2
SKI
Herpes_Helicase
ORC-CDC6-like
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UCU97756
LinkDB
All DBs
Position
complement(3157771..3159834)
Genome browser
AA seq
687 aa
AA seq
DB search
MSYLVLARKYRPRNFTEMVGQEHVVQALTNALTQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGPDGQGGITATPCGVCQACRDIDSGRFVDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVLSHLTQVLAAENVGAEPQALRLLSRAARGSMRDALSLADQAIAFGSGQLHEA
AVRQMLGAVDRSYVFRLIEALAQGDGKTVVETSDTLRLNGLSAASTLEEMSAVLQRMAVF
QAVPQIMSGALDADDPEAAETARLAVLMPADETQLLYSLCLHGRGELGLAPDEYSALTMV
LLRLLAFKPHGGSAEKKTLTLPERAVTGGALAAGEAAALASEGSSAAAPSPLAAPAEFVS
SAAGAAPAGAAPAGVAPAIAPALPPVVLTAAVQPPTVAPAVVTPAVEHPEAAAQDASSEP
PPWPGSEESDHALGAPPVAMALPVRPSERFEQNQPLAQTGKAQAAPEFVAIPVREVPEPG
ARLQPTPHSVPVPASARYTPTPEGDIWHATVQQMVVAEAITALVRELALQSQLVARDGGH
WLLRVERESLNQPTARERLRAALEAAGHATQISVEVGVVIDSPARRNAAAAAERQRRAEE
IVNNDPFVQSLMRDYGARIVPGSIKPA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacctcgtgctcgcccgcaagtaccgcccccgcaatttcaccgaaatggtgggg
caggagcatgtggtgcaggctctgaccaatgcgctgacccagcagcgtttgcaccacgcc
taccttttcacgggcacgcggggtgtgggcaaaacgacggtgtcgcgcatccttgccaag
tcgctcaattgccagggccccgacgggcagggtggtatcacggccacgccgtgtggagtg
tgccaggcttgccgcgacatcgacagcggccgttttgtggattacaccgagctcgacgcg
gcatccaaccggggcgtggacgaggtacagagcctgctggaacaggcggtgtacaagccg
gtgcagggccgcttcaaggtcttcatgatcgacgaagtgcacatgctcacgaacacggcg
ttcaacgccatgctcaagacgctggaagagccgcccgaataccttaagtttgtgctcgcc
acgacggacccgcagaaggtgccggtcaccgttctctcgcgctgcctgcaattcaacctg
cggcccatggcccccgaaaccgtgctatcgcacctcacgcaggtgctggccgccgaaaac
gtgggcgcagaaccccaggcgctgcgcctgctgtcgcgcgcggcacgtgggtccatgcgc
gacgcactctcgctggcggaccaggccatcgcgtttggcagcggccaactgcacgaagcc
gccgtacgccagatgctgggtgcggtggaccgctcttatgtgtttcgcctgattgaagcc
ctggcgcagggcgacggcaaaaccgtggtggagacgtcggacaccctgcggttgaatggc
ttgtcggcggcatccaccctggaagaaatgagcgccgtgctgcagcgcatggccgtgttc
caggctgtgccccaaataatgtccggtgcgctggatgcggacgaccctgaagcggccgaa
actgcccgccttgccgtcctgatgcctgcggatgaaacccagctgctttacagcctgtgc
ctgcatgggcgcggtgagctgggcctggcgccggatgagtattccgcactgaccatggtg
ctgctgcgcctcctggccttcaaaccccacggcggatcggctgaaaaaaaaactctgacg
ctgcctgaaagggcggtgacagggggggctttggctgcgggcgaggcggctgcgttggca
tctgagggctcctctgcggcggccccttcgcctttggcggcgccggccgaatttgtgtct
tctgccgctggagctgcgccggctggggctgctccggctggagttgcgccggctattgcg
ccagccctgccgccagtggttttgacggctgctgtgcagccgcccaccgttgctccggcc
gttgtgacccccgcagtcgaacacccagaggccgctgcgcaagatgcgtcgtcagaaccg
cctccgtggccgggctctgaggaatcagaccacgcacttggggctccgcctgtcgccatg
gcgctgcctgtgcgcccatcagagcgttttgaacaaaatcagcctctggcgcaaacaggc
aaagcgcaggcagctcctgaatttgtagcaattcccgtgcgtgaagtgcctgaacccggt
gcccgcctgcaacccacgccccattcggtgccggtgcctgcatcggcccgctacacgccc
acccctgagggcgatatatggcacgccacagtgcagcagatggtggttgccgaggctatt
accgcgctggtgcgcgagttggcgctgcagtctcaactggtggcgcgcgatggtgggcat
tggctgctgcgtgtggagcgcgagtcgctgaaccagcccaccgcgcgggagcgcctgcgc
gcggcgctggaagccgcgggccacgctacccagatcagcgtcgaggtgggcgtcgtcatc
gacagccccgctcgccgcaatgcagctgcggctgcggagcgccagcgccgcgcggaagaa
attgtcaacaacgacccctttgtgcagtcgttgatgcgtgactacggcgcgagaatcgtg
ccgggcagcatcaagcctgcatga
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