Acidovorax radicis: KI609_17300
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Entry
KI609_17300 CDS
T08078
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
arad
Acidovorax radicis
Pathway
arad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KI609_17300 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arad03019
]
KI609_17300 (pcnB)
Enzymes [BR:
arad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KI609_17300 (pcnB)
Messenger RNA biogenesis [BR:
arad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KI609_17300 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UCU98259
LinkDB
All DBs
Position
complement(3783629..3785269)
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AA seq
546 aa
AA seq
DB search
MIKTFIDKLLGKSTPGTSGGKPHFGKREEVPASVHGINPELVDRRAAEVVATLKQAGFEA
YIVGGAVRDLLLGLRPKDFDVATNATPEQVKGLFRRAFIIGKRFRIVHVVHGRGREHEVI
EVSTFRAYLDNAAAGQVAGNEKTSKAQLSGMQHAVDASGRVLRDNVWGPQDEDATRRDFT
VNAMYYDPVSQIVVDYHKGLQDAKKKTLRMIGDPATRYREDPVRIIRAVRFAAKLSPLGF
SIDAKTAAPLVQSQALLAEVPQSRMFDEMLKLLQTGHAVATIEQLRKLGMATGIYPLLDV
AVERADSAFVKAALVDTDRRVQENKPVAPSFLLACVLWEDVRKGWEDRLARREHTLPALQ
DAIDEVFERRIGDVSGRGKLAADMREIWVMQPRFEKRVGSTPFGMVMQPRFRAGFDFMRL
RADVGEVEEALAEWWQDFQSADDERREDLMDQAREEQKARQKAQPVVKRVARGAAGTPSA
PSSATSAPQKPPRAAGPAVQGEADAGDAAGFAPEGGAPKKRRRRRRKPGADAGGGEGGGP
AATAGE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagacgttcatcgacaaactgctgggcaaatcgacgcccggcacctcgggcggc
aaaccacacttcggcaagcgcgaagaggtgcccgcctcggtccacggcatcaaccccgag
ctggtggaccgccgcgccgccgaggtggttgccacgctcaagcaggcaggtttcgaggcc
tacatcgtaggcggcgccgtgcgcgacctgctcctgggcctgcgccccaaagacttcgat
gtggccaccaacgccacgcccgagcaggtcaaggggctctttcgccgcgccttcatcatc
ggcaagcgctttcgcatcgtgcacgtggtgcatggccgcgggcgcgagcatgaggtgatc
gaggtctccaccttccgcgcctacctggacaacgccgccgcagggcaggtggcgggcaac
gaaaaaacgagcaaggcccagctgtctggcatgcagcatgccgtggatgccagtggccgt
gtgctgcgcgacaacgtctggggcccgcaggacgaagacgccacgcgccgcgacttcacc
gttaacgccatgtactacgacccggtcagccagatcgtggtggattaccacaagggtttg
caggacgccaagaagaagacgctgcgcatgatcggcgacccggccacgcgctaccgcgaa
gacccggtgcgcatcatccgcgccgtgcgtttcgccgccaagctcagccccctgggtttc
agcatcgacgccaagaccgccgcgccgctggtgcagtcgcaggccctgctggccgaagtg
cctcagagccgcatgttcgacgagatgctcaagctgctgcagacaggccatgccgttgcc
accatcgaacagctgcgcaagctgggcatggccacaggcatttacccgctgctggacgtg
gccgtggagcgcgccgactccgccttcgtgaaggctgcgttggtggacaccgaccgccgt
gttcaggaaaacaaacccgtggcgccgagttttctgctggcgtgtgtgttgtgggaagac
gtgcgcaagggctgggaagaccgcctggcacgccgcgaacacaccttgcctgccttgcag
gatgccattgacgaggtgtttgaacgccgcattggtgacgtgtccggccgcggcaagctc
gccgccgacatgcgcgagatctgggtcatgcagccccgttttgaaaagcgcgtgggtagc
accccctttgggatggtgatgcagccgcgctttcgcgcgggtttcgatttcatgcgcctg
cgcgccgatgtgggtgaggtcgaagaagcactggccgagtggtggcaggattttcagtcg
gccgatgatgagcgccgcgaagacctgatggaccaggcccgtgaagaacaaaaggcccgc
cagaaggcgcaaccggtggtcaagcgggtggcgcgcggtgcagcaggaacgccctctgcg
ccatcgtctgcaacatcggcacctcagaagcctccccgtgcggcaggccctgctgtgcag
ggcgaggcagatgcaggcgatgcggctgggttcgcgccagagggcggtgcgcccaagaag
cgccgccgccgtcgccgcaagcccggcgctgatgcgggtggtggcgaaggtggtggtccg
gcggcaaccgctggcgagtaa
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