Acidovorax radicis: KI609_17525
Help
Entry
KI609_17525 CDS
T08078
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
arad
Acidovorax radicis
Pathway
arad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KI609_17525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arad03019
]
KI609_17525
Enzymes [BR:
arad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KI609_17525
Messenger RNA biogenesis [BR:
arad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KI609_17525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UCU98299
LinkDB
All DBs
Position
complement(3839613..3841100)
Genome browser
AA seq
495 aa
AA seq
DB search
MTSSFSNLSLAEPLARAVAEMGYESMTPIQEQAIPVVLTGQDVMGAAQTGTGKTAAFSLP
LLQRLLKHESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMK
PQTIELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSY
LPKQRTTLLFSATFSPEIKRLAGSYLQNPITIEVARPNETASTVEQHFYSAGDDDKRRAI
HQVLKSRGIKQAFIFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLKALEAFKSGEV
DLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSGSDARL
VADIEKLLKKKIDIEALEYDEDRPNIRNQGRINDGRRAWREAGETGDPRDALPSASPRDR
SERREPRENYRGFRPAVASRDPFFEKPYEASSSPDAAPAWEAAKAPARSGVSANIKPKRK
VAALFKAIEPETSTQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttccttttccaatttatcgctggcagagccgctagcgcgcgccgtagccgaa
atgggctacgaatccatgacacccatccaggagcaggccattccggtggtgctcaccggg
caggatgtgatgggcgcggcccagacgggcaccggcaagacggcggctttttcgctgccc
cttttgcagcgcctgctcaagcatgagagtagttccacatcgcctgcccgccaccctgtg
cgtgcgctggtgctgttgcccacccgtgagctggccgatcaggtcgctcagcagattgcc
ttgtacgccaagtacaccaagctacgcagcactgtggtgtttggtggcatggacatgaag
ccccagaccatcgagcttaaaaaaggcgttgaggtgctggtggctacgccaggccgcttg
ctggaccacatcgaggccaagaacgcggtgctcaaccaggttgaatatgtggtgctcgat
gaggccgaccgcatgctcgacatcgggttcctgcctgacttgcagcgcatcctgtcgtat
ctgcccaagcagcgcaccacgctgctgttcagcgccacgttctcgccggagatcaagcgt
ctggcgggcagctacctgcaaaacccgatcaccatcgaggtggctcggcccaacgagaca
gcctccactgtcgaacagcacttttacagtgctggtgacgacgacaaacgccgtgccatt
caccaggtgctcaagagccggggcatcaagcaggcgttcatctttgtgaacagcaaactc
ggttgtgcgcgcctggcccgcagcctggagcgtgaaggtctgaagaccaccgcgctgcac
ggtgacaagagccaggacgagcgactcaaagccctggaagccttcaagagtggcgaagtg
gacctgttggtctgcaccgatgtggccgcacgcggcctggacatcaaagatgtgcccgcg
gtcttcaacttcgacgtgcccttcaacgccgaggattacgtgcaccgcattggccgcact
ggccgtgcgggcgcctctggcttggcggtcacgctggtgtcgggcagtgatgcgcgcctg
gtggccgacatcgagaagctgctgaagaaaaaaatcgacatcgaagccctcgaatacgac
gaggatcgcccgaacattcgcaaccagggccgcatcaacgacggccgccgtgcatggcgc
gaagcgggtgaaacgggcgacccgcgcgatgccctgccatcagccagcccccgtgatcgc
agcgagcgccgtgaaccccgcgagaactaccgtgggtttcgccccgcagtggcctcacgc
gatccttttttcgaaaaaccctatgaggccagcagcagccccgacgctgcgcctgcttgg
gaagccgccaaagcgccagctcgcagcggggtttcggccaacatcaagcccaaacgcaag
gtggccgcgttgttcaaagccatcgagcctgaaacctcgacgcagtga
DBGET
integrated database retrieval system
