Acidovorax radicis: KI609_20220
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Entry
KI609_20220 CDS
T08078
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
arad
Acidovorax radicis
Pathway
arad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KI609_20220 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arad03400
]
KI609_20220 (priA)
Enzymes [BR:
arad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI609_20220 (priA)
DNA repair and recombination proteins [BR:
arad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KI609_20220 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
HypA
Zn_ribbon_6
SopE_GEF
AAA_19
DUF5817
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
UCU98779
LinkDB
All DBs
Position
4432292..4434439
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AA seq
715 aa
AA seq
DB search
MPTPATIVHIALQTPSHSGVGDLLSYASEHPLTPGTLVRVPLGAREVLGVVWDADEATGE
LPDGATLRAIAGVLEGVAPLDRHWRRLVAFAAHYYQRALGEVALAALPPQLRDLKPEQLA
RRLRRPAKAAGDTSDAIQNIALTAEQESARARIAAEKGPFLLFGSTGSGKTEVYLRCVQE
MLEADPGDGFPAQALVMVPEINLTPQLEERFVGRFAPRFGPGAVVSLHSGMTNPQRLKSW
LAAHSGSARIVLGTRMAVFASLPGLKLIVVDEEHDPSYKQQEGARYSARDLAIWRGREQG
AKVLLGSATPSLESWHASRPPTPEDPEGGRYVRLHMPSRIGSSAGAGALARVRRVDMTQQ
PRRAVFSAPLLQAITERVARGEQSMILLNRRGYAPVLHCMDCGWKSDCPHCSAHQVFHKT
DRTLRCHHCGFTVRVPHHCPTCGSPDIHPMGRGTEQLEEQLSALLRNVQRPDGNPARIAR
IDADTTKAKGALEAQLAQVHAGEVDVLVGTQMIAKGHDFRRITLVAAVQPDGALFSSDFR
APERLFALLMQAAGRAGRDAAYMASQGTQPEMWIQSFHPQHAVYEALRTHDYEAFAAQQL
QEREEAAMPPFAYQALVRADARTQEVAQGFLSAATAAAHAAGLPGLERVTLFPPVPLTIQ
RVANVERAQMLMESSSRAALQRFLAAWQPVLQTTRSQPGHKGLIRWLVDVDPLTI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacacccgccaccatcgtccacatcgccctgcaaaccccgtcccacagcggtgtg
ggcgatctgctgagctatgccagtgagcacccgctcacaccaggcacattggtgcgtgtg
cccctgggggcccgtgaggtgctgggcgtggtgtgggatgccgacgaagccacgggtgaa
ctgcctgatggcgccaccctgcgcgccattgccggggtgctcgaaggcgtagccccgctg
gaccggcattggcgccgtctggtggcgtttgcggcgcactactaccagcgtgcgctgggc
gaggtggccctggccgcgctgccgccgcaactgcgcgacctgaagcccgaacagctggca
cgccgcctgcgccgcccggccaaagcggcaggagacacctcggatgctattcaaaacata
gcactcaccgctgaacaggagagcgccagggcccgaattgctgcagaaaaaggtccgttc
ctgctgtttggcagcaccggcagcggcaagaccgaggtgtacctgcgctgcgtgcaggag
atgctcgaagccgacccgggcgatgggtttccggcccaggcgctggtgatggtgcccgag
atcaacctcaccccccagctcgaagagcgctttgtaggccgcttcgccccgcgctttggc
cccggcgccgtggtctccctgcacagcggcatgaccaacccgcagcgcctcaagagctgg
ctggccgcccacagcggcagcgcgcgcattgtgctgggcacgcgcatggccgtgtttgcc
agcctgccggggctcaagctgatcgtggtcgatgaggaacacgaccccagctacaagcag
caggaaggcgcccgctactcggcgcgcgacctggccatctggcgcgggcgcgagcaaggc
gccaaggtgctgctggggtcggccaccccgtcattggagagctggcacgccagccgcccc
cccacgcccgaagaccccgagggcgggcgctacgtgcggctgcacatgcccagccgcatt
ggctccagcgcgggggctggcgcgctggcccgcgtgcggcgcgtggacatgacccagcag
ccccggcgcgcggtgttcagcgccccgctgctgcaagccatcaccgagcgcgtggcgcgc
ggcgagcagagcatgatcttgctgaaccggcgcggttacgcgcccgtgctgcactgcatg
gactgcggctggaaaagcgactgcccgcactgcagcgcgcaccaggtcttccacaagacc
gaccgcaccctgcgctgccaccactgcggcttcaccgtgcgcgtgccccaccactgcccc
acctgcggcagccccgacatccaccccatgggccggggcaccgagcagctcgaagaacaa
ctgagcgccctgctgcgcaacgtgcagcgcccggacggcaaccccgcccgcatcgcccgc
atcgacgccgacaccaccaaggccaagggtgcgctggaggcccagctggcccaggtgcac
gctggcgaggtggatgtgctggtgggcacgcagatgattgccaagggccacgactttcgg
cgcatcacgctggtggcggccgtgcagcccgacggcgcgctgttcagcagcgactttcgc
gcgcccgagcggctgtttgcgctgctgatgcaggcggcgggccgcgctggccgtgacgcg
gcctacatggcatcgcaggggacccaacccgagatgtggatccagagctttcacccccag
cacgcggtgtacgaggcgctgcgcacgcacgactacgaggcattcgccgcccagcaactc
caagagcgcgaagaggccgccatgccaccctttgcctaccaggcgctggtgcgtgccgac
gcgcgcacccaggaggtggcgcagggatttctgagcgccgccaccgccgccgcccacgca
gcaggcctgcccgggctggaacgggtgaccttgttcccgcccgtgccgctcaccatccag
cgtgtggccaatgtcgagcgcgcccagatgctgatggaaagcagcagccgcgcggcactg
cagcgctttctggccgcgtggcagccagtgctgcaaaccacccgcagccaacctgggcac
aaaggcttgatacgctggctggtggacgtggatccgctcaccatctga
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