Agrobacterium radiobacter: ACN9MK_07905
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Entry
ACN9MK_07905 CDS
T11332
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
arai Agrobacterium radiobacter
Pathway
arai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACN9MK_07905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arai03021
]
ACN9MK_07905
03400 DNA repair and recombination proteins [BR:
arai03400
]
ACN9MK_07905
Enzymes [BR:
arai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACN9MK_07905
Transcription machinery [BR:
arai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACN9MK_07905
DNA repair and recombination proteins [BR:
arai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACN9MK_07905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
XRS27937
LinkDB
All DBs
Position
1:complement(1564141..1565151)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSSRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGAVTAGDIQTVG
DIEILNPDHVICTLDDGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLIMTIETNGSVSGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaacttatcaagccgaacaaggtcgagttcacctcgtcc
agccgcaccaaggcaacgctcgttgccgagccgctggaacgtggtttcggcctcaccctc
ggcaacgcgctgcgtcgcgttctgttgtcttctctgcgcggcgccgctgttacggccgtg
cagatcgacggtgtcctgcacgaattctcctccatccccggcgttcgggaagatgtgacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggtgacgattccaagcgc
atggtcgtgcgcaagcagggcccaggtgccgtaaccgctggtgacatccagacggttggc
gacatcgaaatcctgaaccccgaccacgtgatctgcacgcttgatgatggcgctgaaatc
cgcatggaattcaccgtcaacaacggcaagggttacgtaccggctgagcgcaaccgcgcg
gaagatgccccgattggcctcattccggtggacagcctctattctccggtcaagaaagtg
tcctacaaggtggaaaacacccgtgaaggccaggttctcgactatgacaagctgatcatg
acgatcgagaccaacggttcggtttccggcgaagacgccgttgccttcgccgctcgtatt
cttcaggaccagctcggcgtcttcgtcaacttcgacgagccgcagaaggaagcagaagaa
gaatcggttaccgaactcgcgttcaacccggcgcttctcaagaaggtcgacgagctggag
ctgtcggttcgttcggctaactgcctgaagaacgacaacatcgtctatatcggcgacctg
atccagaagaccgaagccgaaatgcttcgcacgccgaactttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggtctgcacctcggtatggaagtaccggcatgg
ccgcctgagaacatcgaagatctcgccaagcgttacgaagaccagtactaa
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