Agrobacterium radiobacter: ACN9MK_12990
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Entry
ACN9MK_12990 CDS
T11332
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
arai Agrobacterium radiobacter
Pathway
arai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN9MK_12990 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arai03019
]
ACN9MK_12990 (pnp)
03016 Transfer RNA biogenesis [BR:
arai03016
]
ACN9MK_12990 (pnp)
Enzymes [BR:
arai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACN9MK_12990 (pnp)
Messenger RNA biogenesis [BR:
arai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACN9MK_12990 (pnp)
Transfer RNA biogenesis [BR:
arai03016
]
Prokaryotic type
tRNA degradation factors
ACN9MK_12990 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
XRS28889
LinkDB
All DBs
Position
1:complement(2641762..2643909)
Genome browser
AA seq
715 aa
AA seq
DB search
MFNQHSVEIEWAGRPLKLETGKVARQADGAVIATYGETMVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDVLSMVAASAALTLSGIPFMGPVGGARVGYINGEYVLNPHLDEMDESVLDLVVA
GTQDAVLMVESEAKELNEEIMLGAVMFGHRGFQPVIDAIIKLAEVAAKEPREFEPEDFSA
LENEMLALAEAELRDAYKITEKAARYAAVDAVKAKVKAHFLPEEGEAKYSPEEIGAVFKH
LQAKIVRWNVLDTKSRIDGRDLSTVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKIALEQAQGGRKHILGEMAN
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEVGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGQEIAADKKKEDGEAAAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcaacactccgtggaaatcgaatgggcaggccgcccgctgaagctcgagacc
ggcaaggttgcccgtcaggctgacggcgccgtcatcgcaacctacggcgagacgatggtt
ctcgcgacagtggtttccgcaaagtctccgaagcccggccaggacttcttcccgctgacc
gtcaactaccaggaaaagacctacgcggccggcaagatccccggcggctacttcaagcgc
gaaggccgtccgagcgaaaacgaaactctcgtttcccgcctgatcgaccgtccgatccgc
ccgctcttcccggaaggctacaagaacgacacgcaggtcgtcgtcacggttatccagcat
gatctggaaaacaacccggacgttctgtcgatggttgcggcttccgcagcgcttacgctc
tctggcattcccttcatgggcccggttggcggcgcgcgcgttggctacatcaacggtgag
tatgttcttaacccgcatctggacgaaatggacgagtctgttctcgacctcgtcgttgcc
ggtacgcaggacgctgttttgatggttgagtccgaggccaaggaactcaacgaagaaatc
atgctcggcgccgtcatgttcggtcatcgcggcttccagccggttatcgacgcgatcatc
aagctcgccgaagttgccgccaaggaaccacgcgaattcgaaccggaagacttctccgcg
ctcgaaaacgaaatgctggcgctcgccgaagccgaactgcgcgacgcctacaagatcact
gaaaaggctgcccgttacgccgccgtcgacgccgtgaaggcgaaggtcaaggcgcacttc
ctgccggaagaaggcgaagccaagtactcgccggaagaaatcggcgccgtcttcaagcac
cttcaggcgaagatcgttcgctggaacgttctcgacaccaagagccgcatcgacggccgc
gacctgtcgaccgttcgtccgatcgtttcggaagtcggcctgctgccgcgcacccacggt
tcggcgctgttcacccgcggtgaaacccaggcgatcgtcgttgcgacgctcggcaccggc
gaagacgaacagtatgtcgatagccttaccggcatgtacaaggaacgcttcctgctgcat
tacaacttcccgccctactcggtcggtgaaacaggtcgcatgggctccccgggccgtcgc
gaaatcggtcacggcaagctcgcatggcgcgctatccgtccgatgctgccgactgcggaa
cagttcccctatacgctgcgcgtcgtttccgaaatcaccgagtccaacggctcctcgtcg
atggcaacggtctgcggcacctcgcttgcactgatggacgccggcgttccgctggcaaag
ccggttgccggtatcgccatgggcctgatcctcgaaggcgagcgctttgcggtcctctcc
gacatcctgggtgacgaagatcacctcggcgacatggacttcaaggtcgccggcaccgcc
gacggcatcacctcgctgcagatggacatcaagatcgccggtatcaccgaagagatcatg
aagatcgctctggagcaggcacagggtggccgcaagcacatcctcggcgaaatggccaac
gccatcaccgaaagccgtggccagctcggcgaattcgcaccgcgcatcgaagtgatgaac
attccggtcgacaaaatccgtgaagtcatcggttcgggcggcaaggtcatccgcgaaatc
gtcgaaaagaccggcgcgaagatcaacatcgaagacgacggcaccgtcaagatcgcctcc
tcgtccggcaaggaaatcgaagcggcccgcaagtggatccactcgatcgttgcagaaccg
gaagtcggccagatctacgaaggcactgttgtcaagactgctgacttcggcgctttcgtc
aacttcttcggcgcccgtgacggcctcgttcacatctcgcagctcgcttccgagcgtgtc
gccaagacctccgacgtcgtcaaggaaggcgataaggtttgggtcaagctgatgggcttc
gacgagcgtggcaaggttcgcctgtccatgaaggttgtcgaccaggccaccggccaggaa
atcgctgccgacaagaagaaggaagacggcgaagccgctgccgaataa
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