KEGG   Agrobacterium radiobacter: ACN9MK_13135
Entry
ACN9MK_13135      CDS       T11332                                 
Name
(GenBank) sigma-54-dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
arai  Agrobacterium radiobacter
Pathway
arai02020  Two-component system
Brite
KEGG Orthology (KO) [BR:arai00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACN9MK_13135
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:arai02022]
    ACN9MK_13135
Two-component system [BR:arai02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   ACN9MK_13135
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 HTH_50 FleQ AAA_16 AAA_2 TadZ_N AAA OKR_DC_1_N
Other DBs
NCBI-ProteinID: XRS28916
LinkDB
Position
1:2675797..2677143
AA seq 448 aa
MTMSRVLLIDDEEELRFSTAQALELSGFAVTMLASAEHALELIGYSFDGVVVSDIRMPGM
DGMTLLQKVRELDPEIPVILMTGHGDVQLAVNAMRNGAYDFIEKPFTPQYLAGIIKRAND
RRALVLENRRLKAVAGKHDDLETRLPGRTQIMVDLRYRIRAIGATDADTLIVGDTGAGKE
VVARALHDISARSNRPFVAINCAALPQTLIESELFGHEAGAFPGALRPRYGKFEHARGGT
ILLDEIGSMPFELQGRFLRVLQERVITRLGSNETVELDVRFIATSKVDLEQEVAAGRFRA
DLLYRLNVATLLVPSLSQRSADIPLLFLHLVREAAARYGREDMEVPQNLLSAISLREWPG
NVRELRNAADRFVLGLESDVSEGSLPFQADGKAALAARVAAYEKSLIAHAIAAHGGNLKS
VYEALGISRKTLYEKMQKYGLHRHMTEV
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgaccatgtcgcgggttctgttgattgatgacgaggaggagctgcgcttttccaccgcg
caggcgctggagctttccggctttgccgtcaccatgctcgcgagtgccgagcatgcgctc
gaactcatcggttacagctttgatggcgtcgtggtcagcgatatcaggatgcctggcatg
gatggcatgacgttgctgcagaaggtgcgcgagctcgatccggaaatacctgtcatcctg
atgacgggccatggtgatgtgcagcttgcggtcaacgccatgcgcaacggcgcctatgat
ttcatcgaaaagccgttcacgccgcaatatctcgccggcatcatcaaaagggcgaatgac
cggcgggcgctggtgctggaaaaccgccgcctcaaggcggtggcgggcaagcacgacgat
ctcgaaacacgtctgcccggcagaacccagatcatggtcgatctgcgataccgcatccgc
gcgattggcgcgacggacgccgatacgctgatcgtcggcgataccggcgcgggcaaggag
gtcgtggcgcgcgcgcttcacgatatcagtgccagaagcaaccggcccttcgttgcgatc
aattgcgccgccctcccgcagacgttgatcgaaagcgaattgttcggtcatgaggcgggt
gcgtttcccggcgcgcttcgcccgcgctacggcaagttcgaacatgcccgcggcggcacg
atcctgctggacgagatcggctccatgcccttcgaattgcagggtcgtttccttcgtgtc
ctgcaggaacgggtgattacccgtctgggctcgaatgaaacggtcgaactcgatgttcgc
ttcatcgccacaagcaaggtggatctggaacaggaagtcgcggctggccggttccgtgcc
gatcttctttatcggctcaacgtggctacacttctcgtgccatctctctcgcagcgcagt
gccgatataccgctcctcttcctgcatctcgtgcgggaagctgctgcgcgctacgggcgg
gaagacatggaggtgccgcaaaatctgctctcggccatctcccttcgtgagtggccgggc
aacgtgcgtgaattgcgcaatgccgcggaccgtttcgttctcggcctggaaagcgatgtt
tccgaagggtcgttgccgtttcaggctgacggaaaagcggctcttgctgcaagggtcgcg
gcttatgaaaaaagcctgatcgcacatgcaattgccgcccacggcggaaatctgaaatcc
gtctatgaggcgctcggcatttcgcgcaaaacgctctatgaaaaaatgcagaaatacggg
ctgcaccggcacatgaccgaggtgtag

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