Agrobacterium radiobacter: ACN9MK_15875
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Entry
ACN9MK_15875 CDS
T11332
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
arai Agrobacterium radiobacter
Pathway
arai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACN9MK_15875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arai02000
]
ACN9MK_15875
Transporters [BR:
arai02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ACN9MK_15875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
TcdA1_RBD_3
Motif
Other DBs
NCBI-ProteinID:
XRS30916
LinkDB
All DBs
Position
2:complement(397738..398760)
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AA seq
340 aa
AA seq
DB search
MKKIILASGTALMLTMGAAQAQDKTLTISVYAFAQDEFKELVYAPFEKQCGCKLVVETGN
SVERLAKMEANKANPVVDLAIVSMADALSATRKDLIQKIDAAKVPNIGKLYDIAKDPNGD
GMSVGVNFYATSIVYRTDKMKIDSWADLLKEGIVDHVAFPNVTTNQGPPALYMLGKAIGK
DTPDLAGAIEAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAPIGRFSWAPFTKLDLPLAW
ATPKEGQTGGMNVLVVPKGTKNEDLALQFMDFWLSTDVQKALAEKLVDSPTNKEVKVSDE
VANNITYGDETAKSLQLIPSAVTLDNRDKWLSEWNAKVGQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcattcttgcatcgggcaccgccctgatgctgacgatgggtgccgcgcag
gcgcaggacaagacgctgacgatctcggtctacgccttcgcgcaggacgaattcaaggaa
ctggtctatgcgccgttcgaaaagcaatgcggctgcaagctggtcgtagagaccggcaac
agcgtcgagcgcctcgccaagatggaggccaacaaggccaatccggtggtcgatctcgcc
atcgtctccatggcggatgcgctttccgccacccgcaaggacctgatccagaagatcgac
gccgccaaggttccgaacatcggaaagctctatgacatcgccaaggatccgaatggcgac
ggcatgagcgtcggcgtcaatttctacgccacgtcaatcgtttaccgtaccgacaagatg
aaaatcgatagctgggccgatctcctgaaggagggtatcgtcgatcacgtcgccttcccg
aacgtcaccaccaaccagggtccgccggcgctttatatgctcggcaaggccatcggcaag
gacacgcctgatcttgccggcgctatcgaagccgtgggcgaaaagaaggacgatatcgtc
acattctacgtcaagtcctcgcagctggtgcagctgatgcagcaggaagaaatctgggca
gcgcccatcggccgtttctcctgggcgccctttaccaagctcgatctgccgcttgcctgg
gcaacccccaaggaaggccagaccggcggcatgaacgtgctcgtggtgccaaagggcacg
aagaacgaagatctggcgctgcagttcatggatttctggctctcgaccgacgttcagaag
gcgctggccgaaaagctcgtggacagcccgaccaacaaggaagtcaaggtgtccgacgag
gtggcgaacaatatcacctatggcgacgaaaccgcaaaaagcctgcagctcattccttcc
gccgtgacgctcgacaaccgtgacaagtggctgtcggagtggaacgccaaggtcggccag
taa
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