Aminithiophilus ramosus: KAR29_02165
Help
Entry
KAR29_02165 CDS
T08824
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aram
Aminithiophilus ramosus
Pathway
aram03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aram00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KAR29_02165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aram03019
]
KAR29_02165
03009 Ribosome biogenesis [BR:
aram03009
]
KAR29_02165
Enzymes [BR:
aram01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KAR29_02165
Messenger RNA biogenesis [BR:
aram03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KAR29_02165
Ribosome biogenesis [BR:
aram03009
]
Prokaryotic type
rRNA helicases
KAR29_02165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QTX32762
UniProt:
A0A9Q7AQ07
LinkDB
All DBs
Position
522951..524414
Genome browser
AA seq
487 aa
AA seq
DB search
MSINTVRFSDFDLKPSIQEAIAQHGFETPTPVQEAVLGLPDVLSTDLVVQAKTGSGKTLA
FSLPLINDLVAGGVPRILVLAPTRELAQQTAGEMEWLGRPLGMSVAVLVGGVPIGPQISQ
LRRGASLVVGTPGRVIDHLERGTLNAATIESLILDEGDHMLDLGFRDELESILKRMTAIK
RTWLFSATIPDSVRYLVRRYLKDPRKLTLSVDETVNDDISHKAFVCPSRRRYEALVNVLL
WERPERAIVFCATKVETADVALRLAQAGFGAHPIHGDMGQRERNHALEMFRSSTTGILVA
TDVAARGLDVTGVTHVIQLGLPSNIEAYVHRSGRTGRAGHSGISVTLLSPVEARRMKGLV
RSFSVQINWFPVPDRGDLEKLEHLRLNEELDKLAALPDGKDYGELARAILERDDAVEVTA
GLLARLAFEGPRGYSLKAELEAEQDRANRDRGRRPDPRSSNRRSEYRGDRSRNFAASGSR
PRPRGAR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgtccatcaacaccgttcgtttttccgattttgatctgaaacccagcattcaagaggcc
atcgcccagcacggcttcgagacgcccacgcccgttcaggaggctgtcttaggccttccc
gacgtcctgtcgacggatctcgtcgttcaggccaagacgggctcgggcaagaccctcgcc
ttttcccttcccctcatcaacgacctcgtcgccggaggcgttccccgcatcctcgttctg
gcgccgacgcgggaactggcccagcagacggcgggagagatggagtggctcggccgtcct
ctgggcatgtccgtggccgtcctcgtcggaggcgttcccatcggcccccagatttcccag
ctccgccgcggcgcctctctcgtcgtcgggacgccggggcgggtcatcgaccacctcgag
cggggaaccctcaacgccgccacgatcgaaagccttatcctcgacgaaggggaccacatg
ctcgacctgggtttccgcgacgagctcgagtccatcctgaagcggatgaccgccatcaaa
aggacctggctcttctcggccaccattcccgactcggtccgctacctcgtcagacgctac
ctcaaggatccgcgcaagctgaccctttccgtcgacgagacggtcaacgacgacatctcc
cacaaggccttcgtctgtccctcgcggagacgctacgaggccctcgtcaacgtcctcctc
tgggagcgtcccgagcgggccatcgtcttctgcgccaccaaggtggagacggccgatgtg
gcccttcgcctggcccaggccggtttcggcgcccatcccatccatggcgacatggggcag
agggagcgcaatcacgcgctggagatgttccggagcagcacgacgggcatcctcgtcgcc
accgacgtggccgcccgcggcctggacgtgacgggtgtgacccacgtcattcagctcggt
ctcccctccaacatcgaggcctacgtccaccgcagcgggcggacgggccgggccggccac
agcggcatcagcgtgacgctgctgtcgcccgtcgaggcccgccgcatgaagggcctcgtc
cgcagcttctccgtccagatcaactggtttcccgttcccgacaggggcgacctggagaag
ctggagcatcttcgcctcaacgaggagctggacaagcttgccgctcttcccgacgggaag
gactatggcgagctggcacgggccatcctcgagcgggacgacgccgtcgaggtgacggcc
ggcctgttggctcgactggccttcgaagggcctcgaggctattccctcaaggcagagctg
gaggccgaacaggaccgggccaaccgcgatcggggccgtcgtcccgatccccgcagcagc
aatcgccgaagcgagtacaggggcgatcgctcccgcaatttcgccgcctccggaagtcgt
ccccgccctcgcggcgcccgctga
DBGET
integrated database retrieval system
